Gene Ppha_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2038 
Symbol 
ID6462866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2127323 
End bp2131048 
Gene Length3726 bp 
Protein Length1241 aa 
Translation table11 
GC content47% 
IMG OID642728233 
Producthypothetical protein 
Protein accessionYP_002018863 
Protein GI194337069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.769996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT CCGACCACGT CAAGAGTATC CGTGAGCTGA TTTCGTCAGC CTTTGCGAAC 
CAGTTTGCCC GGCTCGGTAT CACAGCAGAG CGCCAGAGTG AACCTGCCAC CCTCGACCAG
CCACAGCAAG AGCTTCGGGC AACGCTTGAT GCCATCCTTG AAAGCCACAA CAAAGAGACC
GGCACACCTG CCGCAGCCTA CCAGAAAGCG CTTGACGACT ACACCTTTAC CCTCTTCAAC
CGGCTTGCCG CGCTCAAGGT GATGGAGGCA CACCGGATGT TCCCCGAAGT GCTCACCAAA
CGGGCTGAAA ATGGCGGTCA CTCTTTTGGC CACCGTGCAT GGCTGGAACA AAACCCGTTC
ATGTCTTCCG AAGAGCTTGA GGGATTGCTC TTCTATATCC GCTTTGCCTT CGACACCCTC
AGCGACAAAA TCCGACTCTA CTCCCGTGAG AGCACCTACG ACATGCTTCC CTACGTGCTC
GACCTGAACG CCATTATCGG CGCATTCAAT GCCGTTGAGG AGGACAGTGA TGTTGGCTCT
GAAATCTGGC TCTCGGACGA CATTATGGGG TGGCTTTACG AAAGCTACAA CCTCTCCAAA
AAACAAGCAT TTAAGGAGTC TGGCGACAAG ATCGAGTTCG ACAAGGTTGC CCTCTCCTCC
CAGGTCTATA CGCCGCGCTG GGTTGTTGAG TTTCTGGTGA ACAACTCCCT CGGCAAACTC
TATCTGGAGA TGTACCCAGA TTCAGAGATT GGGCGAAAGT ACAAAATTGC CAACATCCCC
GCCACACGGG TGCGCGAGCC GAAACCCTTG ACTGAAATTC GGCTGATTGA CCCGGCAACA
GGCTCCGCAA ACTTTCTGCT CTACGCCTTC GACCTCTTTT ATGACCTCTA CCTCGACCAG
ATTGAGAACT ATGGCGCTGA GTATGACGAA GAGGAGATCG GGAAGCTCAT TATTGAGCAC
AACCTCTACG GTGTTGACCT CGATGACAGG GCAATCCAGA TTGCGCAGTT GGGTCTCTAC
ATTAAGGCAT TGCGACGGAA CAGCCGCATC CATATCGAGC GCTTCAATGT GGTCTCCTCC
GATTTTTACC TGCCCGATTT TGATGTGGTG GCAAGCTCCT TCTCCGGCAG TCTGGCTACC
GACTCCCAGC AGATGAGTTT GATCAAGGCA ATCTGGGCCG ACCTGCAGCG AGCATACCAG
TTTGGCTCAC TCATCAGGAT TGAAGAACGC TTCAATGCCA ATTTTGCATC ACTCTTTGAA
AAGGCAAAAG CTGACCAGCA GGATCTTTTT GCCACGGCTG AATTTGAGAG CCAGGAAAAG
TTCAAAGCGG AGCTGTTCCG TGATTTGCAC AACGCCGTAT CGGCATACAG CCAAAGCAGC
GGCAACAGCT TTTTGCGGAG CAAGAGTAAT GATGCCATCA CCTTTCTGGA GATCATGACC
CGGAAGTACG ATGTAGCGGT GGCGAATCCG CCCTATACCG ATTCAAGTGA TTTCGGGAAG
GAGTTGAAAG CTTTTATTGA AGGGAATTAC AAGAAGCCTT ATGGATTTCA CTCAAACCTC
TATGCGACTT TTATAAAACG ATGTGCGGAG ATTATCACTG ATACCGGCAA GATTGCGATG
ATTCATCCGC TCACCTTCAT GTATATCAAA ACCTTTGAGG GGGTTCGGGA ATATATCCTT
AACAATTTGC ATATCAATAT TTTTGTCGAT TATGGCTTGA GCAACCTCTT TGGCTCCATA
ATGGTTGACC CTGCGTTTTA TGTTCTGGAA AAAGGGATAA CGACCAATGA CAAATCACTC
TTTATTTCAC TGGATCAGTA TACCCGTACT CCACAGGAGA AATTCAAGAA AGATTATGCT
CTCACAGCTC TGGAGAATTT TGTTTCAGGA AAGACGGATA AACATAATAT TCTCATTAAT
CAAGACAAGC TGAAAATCAT CAAGTCATGG CCATTTATTT ACTGGATTAG TGATGCTTTT
CGGGAGAAGT TTGGAAGTAA TGCTCTTCAA GATTCATTTT ATGTCGCTCA AGGTTTAGTT
ACTTCAAACA ATGAGAGATT CTTGAGGTAC ACATGGGAGG TTTTTAATGA TTATGCAGAA
GAAAATATTT TAGCGAATCA AAAATGGTTC TTTTATCCTA AAGGAGGTAT ATACTGTAAA
TGGCTTGGAA ATAATTGGTT ATTGGTAAAT TGGGAGGACA ATGGGTATGA GATTAAAAAT
TTTTGTGATG ATCAAGGCAA ACAAAAATCA CGGCCTCAGA ATGAATCCTT GTATTTTAAG
GCAGGGATAA CATATGGAAG CAGTGGCTCG AAAGGCATAT GTTTTAGGTA TATGCAAACA
GGGCAAATAT TTTCAGGCGG CGGCCCCGGA ATTATTCCTA AAGCTTTTAA CAACATTCCT
TATGTGATTG CTTTTTTAAA TTCAAAGCTT TCCGCATACC TTCTTGGGTC TCTTAATCCT
ACAGTAAATA CTACACAAGG GGATTTAAAT AGGGTTCCTT TTTGTCTTCC AACAAAAAAG
CTTGAGGACT CTATTACGTA TTTTTCAAAT ACGGCGATTG ACGTAAAAAA ACGGTTATAT
TCATTTTCTT TGGTGGAATC AAACTATGAA GCTAATCCTT TTTTGATTGG CATTTCAAAT
ATAGACCTTC GAGAAAAGAT CAAATCTTTT TTCACCTACG AAAACCACCT CCTCACCCAA
GTCCTGCTCA ACGAAGCCAT CATCAACGAA AAGATCTTCG AAGTCTACGA ACTCACCCCT
GAAGACAAGG CAATGGTGCT TGCCAAAGAG GGCGAATCCA TCGGTGGTCT CCCTGTATTT
CCCGAAGCCC GCGCAGCATA TCTGACTGAA ACAGAGGTCA CGGCAGAGTT CCCGCTTGAT
AAAATCTTTA CTTTCATTGA ATCCCTGCCC ACCATGACCA TGAGCGGGCA GGAGATTGCC
GACCTCACTG CAAAGTTCGA GACGCTCTAC CAGAGCAACA ACGACCTCGA AGAGTTCTGC
ATCAGGAACA AGATCAACCC GATTAACGTC TGGTACCTCT TCAAGAAAAG TGGAGTGCTG
CCGCAGCAGC GGGCCAAAAC CATTGCGATG GAGTTCCTCG CCGACCTGAT CCGCGAAATT
CTCAATGAGG ACGACGACGG TATTGTCCCT CTGGTACGTA ACACCGGCGA AGAGATATTG
ATTGACCGCA TTGAAAAGAA GTTTGAGGAG AAGGGGCTCA CTTCCGCGCA GTTTGCCGCT
TTCCCGACCG TTCTTGGCAA GGAGATCAAC GACTACATCA ACAACAAAAA CTTTTTTAGC
GACCTCTCCG ATCACCTCAA CCTCTTCATG TACCTGCCAA AGACACCATT TATCTGGCAT
ATCACCTCCG GGCCACGTCA GGGATTTGAT GCCTTCATCA TCATCTACAA ATGGAGTCGC
GACAAGCTCT TTACCCTGAA GTCGGTCTAT ATTGAAAAGC GTGAGACGGC GCTGCGCAAC
CGCCAGTCAG ACCTGCTTGG CGAGAAAAGC GCACAGGCAG AAGAGGAGAA GGATACCATT
TTCCATCAGC TCAAGGAGAT TGAGAGCCTC CGGAAAAAGA TTGACGAACT GCTCTCCGAA
GGCTACGACC CCAAGCTCGA CGACGGTGTC GGCAAAAACA TCGCTCCCTT GCAGAAGAGG
GGTATCATCG CTTATGAGGT GCTGAATCCG GGACAGCTCA AAAAGTATCT GAATGCAGAG
TGGTAA
 
Protein sequence
MKLSDHVKSI RELISSAFAN QFARLGITAE RQSEPATLDQ PQQELRATLD AILESHNKET 
GTPAAAYQKA LDDYTFTLFN RLAALKVMEA HRMFPEVLTK RAENGGHSFG HRAWLEQNPF
MSSEELEGLL FYIRFAFDTL SDKIRLYSRE STYDMLPYVL DLNAIIGAFN AVEEDSDVGS
EIWLSDDIMG WLYESYNLSK KQAFKESGDK IEFDKVALSS QVYTPRWVVE FLVNNSLGKL
YLEMYPDSEI GRKYKIANIP ATRVREPKPL TEIRLIDPAT GSANFLLYAF DLFYDLYLDQ
IENYGAEYDE EEIGKLIIEH NLYGVDLDDR AIQIAQLGLY IKALRRNSRI HIERFNVVSS
DFYLPDFDVV ASSFSGSLAT DSQQMSLIKA IWADLQRAYQ FGSLIRIEER FNANFASLFE
KAKADQQDLF ATAEFESQEK FKAELFRDLH NAVSAYSQSS GNSFLRSKSN DAITFLEIMT
RKYDVAVANP PYTDSSDFGK ELKAFIEGNY KKPYGFHSNL YATFIKRCAE IITDTGKIAM
IHPLTFMYIK TFEGVREYIL NNLHINIFVD YGLSNLFGSI MVDPAFYVLE KGITTNDKSL
FISLDQYTRT PQEKFKKDYA LTALENFVSG KTDKHNILIN QDKLKIIKSW PFIYWISDAF
REKFGSNALQ DSFYVAQGLV TSNNERFLRY TWEVFNDYAE ENILANQKWF FYPKGGIYCK
WLGNNWLLVN WEDNGYEIKN FCDDQGKQKS RPQNESLYFK AGITYGSSGS KGICFRYMQT
GQIFSGGGPG IIPKAFNNIP YVIAFLNSKL SAYLLGSLNP TVNTTQGDLN RVPFCLPTKK
LEDSITYFSN TAIDVKKRLY SFSLVESNYE ANPFLIGISN IDLREKIKSF FTYENHLLTQ
VLLNEAIINE KIFEVYELTP EDKAMVLAKE GESIGGLPVF PEARAAYLTE TEVTAEFPLD
KIFTFIESLP TMTMSGQEIA DLTAKFETLY QSNNDLEEFC IRNKINPINV WYLFKKSGVL
PQQRAKTIAM EFLADLIREI LNEDDDGIVP LVRNTGEEIL IDRIEKKFEE KGLTSAQFAA
FPTVLGKEIN DYINNKNFFS DLSDHLNLFM YLPKTPFIWH ITSGPRQGFD AFIIIYKWSR
DKLFTLKSVY IEKRETALRN RQSDLLGEKS AQAEEEKDTI FHQLKEIESL RKKIDELLSE
GYDPKLDDGV GKNIAPLQKR GIIAYEVLNP GQLKKYLNAE W