Gene Ppha_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2018 
Symbol 
ID6462926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2109930 
End bp2110454 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content32% 
IMG OID642728216 
Productpeptidase M15D VanX D-ala-D-ala dipeptidase 
Protein accessionYP_002018846 
Protein GI194337052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.538777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAA CAAAAATTGT TGACTTAAGA ACTGTGCCTA TTAATTTTTA TCATAAACTT 
TCAAATGAAG ATTATGTTGA TGTTAGAGCG ATGGGGTTAT CTGGTAATAA TCATTACTTC
ATAACAAATA ACCCTCCATA TTATACTTCA ATCAAAGGTT CAACGGAAAA ACTATTACTC
AGAAAAATTG TTGTTCTTAA ACTTATCAAA ATAAATAAGA AACTAAATAA AAATGGAATT
GAACTCTATT TATTTGATTT CTATAGACCT ATTAAAGTCC AACAATTTCT TTATAATGTT
TGGCTACCAG CGTATTTAAA AAAAATTCAT CCCCATTACA CTCAGGGTGA CATTACTATG
GAATTAAACT TTTATTCAGC TAAACCTCCA ATATCAGAAG ATGAGTTTGA CAGGAATGCA
CCTCCCCCTC ACACAACTGG TGCAGCGATG GATGTTACAC TAAGATTTAA AGACACAAAG
GGGCTCTTCG CGGCATTTAA TGGAAACAGA GTAATAATGG CTTAG
 
Protein sequence
MQRTKIVDLR TVPINFYHKL SNEDYVDVRA MGLSGNNHYF ITNNPPYYTS IKGSTEKLLL 
RKIVVLKLIK INKKLNKNGI ELYLFDFYRP IKVQQFLYNV WLPAYLKKIH PHYTQGDITM
ELNFYSAKPP ISEDEFDRNA PPPHTTGAAM DVTLRFKDTK GLFAAFNGNR VIMA