Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2018 |
Symbol | |
ID | 6462926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2109930 |
End bp | 2110454 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642728216 |
Product | peptidase M15D VanX D-ala-D-ala dipeptidase |
Protein accession | YP_002018846 |
Protein GI | 194337052 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.538777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGAA CAAAAATTGT TGACTTAAGA ACTGTGCCTA TTAATTTTTA TCATAAACTT TCAAATGAAG ATTATGTTGA TGTTAGAGCG ATGGGGTTAT CTGGTAATAA TCATTACTTC ATAACAAATA ACCCTCCATA TTATACTTCA ATCAAAGGTT CAACGGAAAA ACTATTACTC AGAAAAATTG TTGTTCTTAA ACTTATCAAA ATAAATAAGA AACTAAATAA AAATGGAATT GAACTCTATT TATTTGATTT CTATAGACCT ATTAAAGTCC AACAATTTCT TTATAATGTT TGGCTACCAG CGTATTTAAA AAAAATTCAT CCCCATTACA CTCAGGGTGA CATTACTATG GAATTAAACT TTTATTCAGC TAAACCTCCA ATATCAGAAG ATGAGTTTGA CAGGAATGCA CCTCCCCCTC ACACAACTGG TGCAGCGATG GATGTTACAC TAAGATTTAA AGACACAAAG GGGCTCTTCG CGGCATTTAA TGGAAACAGA GTAATAATGG CTTAG
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Protein sequence | MQRTKIVDLR TVPINFYHKL SNEDYVDVRA MGLSGNNHYF ITNNPPYYTS IKGSTEKLLL RKIVVLKLIK INKKLNKNGI ELYLFDFYRP IKVQQFLYNV WLPAYLKKIH PHYTQGDITM ELNFYSAKPP ISEDEFDRNA PPPHTTGAAM DVTLRFKDTK GLFAAFNGNR VIMA
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