| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2010 |
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| Symbol | sucA |
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| ID | 6462949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2099255 |
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| End bp | 2102083 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728209 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_002018839 |
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| Protein GI | 194337045 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGC AGTATAGCAG CAACTCCTAT CTTTTTGGAG GCAACGCCCC TTATATCGAA
GATCTTTACG AAGCCTATCT TGATAATCCC GCTTCTGTCT CTGAAAGCTG GCGGGCCTAC
TTTGACGCGA TGCAGCATGT GCCGGGTGCC AATGGGGATG CCCGCGATAT CGCACACTCG
CCTGTACAGG CATCGTTTGC TGAAAGAGCC CGTCTTGGCC CGATCTGCCG TGTCATCGCC
AGTCCTGATG CGGAACTGGG ACGTAAACGG GTTTCGGTGC AGAAGCTTAT CGCAGCCTAC
CGCAACATCG GCTCCCGCTG GGCGAATCTT GATCCGCTGA AGCGGCAGGA GCGACCTGCG
TTGCCTGATC TCGAACCCTC GTTTTACGGT TTTTCCGATA CCGACATGGA TATTGTTTTC
AATACAAGCA ATACCTATTT CGGCAAGGAG ACCATGCCGC TGCGCGAACT GCTGCAGAAT
CTGCGCGAGA CCTACTGCGG CACCCTCGGC ATCGAGTTCA TGTACATCAC CGACCAGACG
GAAAAGCGGT GGTGGCAGGC GAAGCTTGAA ACCATACGCT CAAAACCGGA TTTCAGTACG
GAGAAAAAAA AACATATTCT TGAACGGCTG ACGGCGGCTG AAGGATTTGA GCGTTATCTG
CATACCCGTT TTATCGGCCA GAAGCGCTTT TCTCTTGAAG GCGGAGACAG CTTTATTGCC
TCCATGGATG AGCTGATTCA GCGTGCCGGA AAAGCGGGAG TTCAGGAGAT TGTCATCGGG
ATGGCACACA GGGGACGGCT CAATGTGCTG GTCAATATCA TGGGAAAAAA TCCGCTTGAC
CTCTTTGCCG AGTTTGAGGG GAAACATGCC GATGATCTTC CTTCTGGCGA TGTGAAATAT
CATCAGGGCT TTACCAGTGA CCTTGCCACT CCCGGAGGGC CGATCAATCT CTCTCTGGCC
TTCAACCCGT CACACCTTGA GATTGTCAAT CCGGTAGTCG AAGGGGCGGT AAAGGCGCGT
CAGGTTCGCC GTGGCGACCG TGATGGTTCG CAGGTGCTGC CGATACTGGT TCACGGCGAT
GCTGCATTTT CGGGGCAGGG TGTGATCATG GAGACGCTGA ACCTTGCTCT TACCCGTGGA
TACGGCACGG GTGGCACCGT TCATATTGTC ATCAACAACC AGATCGGTTT CACCACCTCC
GATCCGCGCG ACAGCCGTTC AACAACCTAT TGCACCGATG TTGTCAAGAT GATTGAGGCT
CCGGTGCTCC ACGTCAATGG TGACGACCCT GAATCGGTCG TCCTTGCAAC ACAGATGGCG
CTTGATTACC GGCAGGCTTT CAAGCGTGAT GTGGTGATTG ATATTATCTG CTTCCGCAAG
CTTGGTCATA ATGAGCAGGA CACACCGGCC ATGACCCAGC CGCTCATGTA TAAAAAAATT
GCCCAGCACC CCGGCACCCG GAAACTCTAT GCGGAGCGGC TTGAGTCGCA GGGGGTTATC
GGCGAAGCGT ATGGCGCAGA GTTGAGCAAA CAGTTCCGCA AGGATCTTGA TGCGGGCAAG
TACAGCACCA ATCCGGTACT GGTGAATAAA ACGATCTTTA CGGCTGAACC GACGGCGGGC
CGCAATGAGG CCTCCGAAAC CGGCGTGCCC CTTGCCGAGC TCAAACGGTT GTCGGAGATG
CTTACAAAAA TCCCTGAGGG GTTCAAGCTT CACCCGCTGG TTGAAAAAGT GGTCACCGAC
CGTGCCCGCA TGGGACGCGG TGAACAGCCT CTCGACTGGG GCATGGGCGA GCATCTGGCA
TTCGCTTCGC TGGTTGCCGG AGGCTACCCG ATCCGTATTA CCGGCCAGGA CAGCGGCAGG
GCAACATTTT CGCACCGTCA TGCGGTCTTT CATGACCAGA ATCGTGAAAA ATGGGACTCT
GGAACCTACA TCCCGCTGCA GAATATCGCC GACAATCAGG CCACCTTCAC GGTCATTGAT
TCGGTGCTCT CCGAAGAGGC GGTGCTTGGC TTTGAGTACG GCTACTCCAT TTCAGCGCCC
GATACGCTGG TGATCTGGGA AGCGCAGTTC GGCGACTTTG CCAATGGAGC GCAGGTATTA
ATTGACCAGT TTATCACCTC CGGAGAGGTG AAGTGGGGCC TGGCATCCGG CCTTACCCTC
ATGCTGCCTC ATGGCTATGA AGGACAGGGG CCGGAACACT CTTCAGCCCG TCCTGAGCGT
TTCCTGCAAC TCTGCGCCGA AAATAATATC CAGGTTTGCC AGCCATCCAA CCCTGCCCAG
ATTTTTCATC TGCTCCGTCG GCAGATGACC ACGATGAGGC GCAAACCGCT GATCATTCTC
ACGCCGAAAT CGCTGCTCCG CAACAAGGAT GCGGTCTCTC AGCTTGCCGA TCTTTCGCAG
GGAAATTTCC GGAACATTAT CGGCGATGCA ACGGCAGCTC ATGAAAAAGT TGAACGACTC
ATAGCCTGCT CCGGCAAAGT GTATTATGAC CTTATCAACC GGCGACAGGA AAACACGCAG
GAAAAGGTCG CCATTATCCG TATTGAACAG CTTTACCCCT TCCCGTTCGA TGAGTTCAAG
GGGGTGCTTG ATCACTATCC GAAACTCAAA GAGATTGTCT GGTGCCAGGA TGAACCGAAA
AATCAGGGGT ACTGGCGTTT TCTCCAGCAC TATATCATGA ACGCGATGAG CCCCGGCCAG
CAGTTCGGCT ATGCAGGAAG GCTCGCATCT GCATCTACTG CCTGCGGATA CGCCGCAACA
CATGCGATAC AGCAGAAAGC ATTGCTCGAT CAGGCTTTCG GTGAGTTCAG TGTTTTTTTT
AATAAATAA
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| Protein sequence | MMQQYSSNSY LFGGNAPYIE DLYEAYLDNP ASVSESWRAY FDAMQHVPGA NGDARDIAHS
PVQASFAERA RLGPICRVIA SPDAELGRKR VSVQKLIAAY RNIGSRWANL DPLKRQERPA
LPDLEPSFYG FSDTDMDIVF NTSNTYFGKE TMPLRELLQN LRETYCGTLG IEFMYITDQT
EKRWWQAKLE TIRSKPDFST EKKKHILERL TAAEGFERYL HTRFIGQKRF SLEGGDSFIA
SMDELIQRAG KAGVQEIVIG MAHRGRLNVL VNIMGKNPLD LFAEFEGKHA DDLPSGDVKY
HQGFTSDLAT PGGPINLSLA FNPSHLEIVN PVVEGAVKAR QVRRGDRDGS QVLPILVHGD
AAFSGQGVIM ETLNLALTRG YGTGGTVHIV INNQIGFTTS DPRDSRSTTY CTDVVKMIEA
PVLHVNGDDP ESVVLATQMA LDYRQAFKRD VVIDIICFRK LGHNEQDTPA MTQPLMYKKI
AQHPGTRKLY AERLESQGVI GEAYGAELSK QFRKDLDAGK YSTNPVLVNK TIFTAEPTAG
RNEASETGVP LAELKRLSEM LTKIPEGFKL HPLVEKVVTD RARMGRGEQP LDWGMGEHLA
FASLVAGGYP IRITGQDSGR ATFSHRHAVF HDQNREKWDS GTYIPLQNIA DNQATFTVID
SVLSEEAVLG FEYGYSISAP DTLVIWEAQF GDFANGAQVL IDQFITSGEV KWGLASGLTL
MLPHGYEGQG PEHSSARPER FLQLCAENNI QVCQPSNPAQ IFHLLRRQMT TMRRKPLIIL
TPKSLLRNKD AVSQLADLSQ GNFRNIIGDA TAAHEKVERL IACSGKVYYD LINRRQENTQ
EKVAIIRIEQ LYPFPFDEFK GVLDHYPKLK EIVWCQDEPK NQGYWRFLQH YIMNAMSPGQ
QFGYAGRLAS ASTACGYAAT HAIQQKALLD QAFGEFSVFF NK
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