| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2007 |
|---|
| Symbol | |
|---|
| ID | 6462953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2094639 |
|---|
| End bp | 2096006 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642728206 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018836 |
|---|
| Protein GI | 194337042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAG CCAAACAATT GATGGAGATT GAGACCGTCG TTGACCGCTT CACGCCGGTA
ACACCGGAAA GCCCTTTCTA TGTTGATTTC AAAAACCTGA GAGGCGATTT TCAGGAACGT
GAAGTTCTGA GCATGTTGAA TGTACAGGCA AATGCCAACG GGCAGTATGA ATTTCAATAT
GATCCGAATC GCACCAGTAA AACCCTTCTC TTCCTGGCCG GAATGCGTGG ATCGGGCAAA
ACATCCGAAC TTGCCAAATA TGCCTTGTTG CTCAACTCAC CCAAATGCTT TTTTGTGGTC
ACCTGCAACG TGGATGAAGA GCTCGATATG GATAACGTGC AGTACATGGA CATCCTGATC
TTTCAGCTCG AAAAATTGCT GATACGTGCC AGTGAGGTGA ATCTGAAGCT CGACAGCACC
ATTCTCGAAT CGATGAGCAA ATGGTTTCAG GACAGGGTAA AGGAGATCAA TACCTCGCTG
AAAGGTGAGG GCAGTGCCGA AATAGAGCTT GATACCGACA AACCTCTCTC ATTAACCTCT
CTGTTTGGGC GAATGCTGGG GCTTACCGCC AGGCTGAAAA TGGGACTCTC CGGCACTCGG
GAACATGCTG AAACAATCCG CAACAGCTTT AAAAACCGGT TTGTTGATTT TTCCGCAAAA
TTCAACACCT TTATCGATCT AACCAAAGAA CAACTGCGCA AGGAAGACAA GGCACGAGAG
ATTCTCTTTA TCGTTGATGG TCTTGAAAAA ACCATGAGCG CTGATACACG CCGCAAAATT
ATCATGGAGG AATCAAACCG CATTCGCCAG ATAAAAGCCA ACACCATCTT TACGCTGCCC
ATCGAGTTGA TGAAAGAGGA GCAGCATATC CGCCACTTCA GTGAAATCAT TGCCTTTCCC
TTTATCAAAC TCAAAGAGCG CGACGGAACT ACCGTTACAG AAGCTGTCGC CCTGTTTGAA
GAGTTCGTCT ATAAACGTAT CAGCCCCTCA CTTTTCGACT CACCCGAAAC GGTCAAAGAG
GCGATCCGGT ACAGTGGCGG TTCACCGAGG CAGTTGCTCC GCATTATCAA GCAAGCCAAC
TGGTATACCG ACGAAACGAA AGGAAAGATC ACACAACAAA GCATGGAAAA GGCTCTTGAC
AAGCTTGGAA ATAATATGGC CAGATATCTT GAACCTGGCG ATTTTGAGCT GTTAAAAAGA
CTGAAAACCG ACCTTGCGGC AGGAAATCCG ATTGGTTTCA ACAACGACAT TCAGGGACTC
CTCGAGAAAG AGGTTCTTTT TGAGTATAAC GATGGCACCC ACAAAAGCGT CAATCCGCTG
CTCGAACGCT CGAAGCTCTA CAAGCACTAC GTCTCTGACC GCCCATGA
|
|---|
| Protein sequence | MQQAKQLMEI ETVVDRFTPV TPESPFYVDF KNLRGDFQER EVLSMLNVQA NANGQYEFQY
DPNRTSKTLL FLAGMRGSGK TSELAKYALL LNSPKCFFVV TCNVDEELDM DNVQYMDILI
FQLEKLLIRA SEVNLKLDST ILESMSKWFQ DRVKEINTSL KGEGSAEIEL DTDKPLSLTS
LFGRMLGLTA RLKMGLSGTR EHAETIRNSF KNRFVDFSAK FNTFIDLTKE QLRKEDKARE
ILFIVDGLEK TMSADTRRKI IMEESNRIRQ IKANTIFTLP IELMKEEQHI RHFSEIIAFP
FIKLKERDGT TVTEAVALFE EFVYKRISPS LFDSPETVKE AIRYSGGSPR QLLRIIKQAN
WYTDETKGKI TQQSMEKALD KLGNNMARYL EPGDFELLKR LKTDLAAGNP IGFNNDIQGL
LEKEVLFEYN DGTHKSVNPL LERSKLYKHY VSDRP
|
|---|
| |