Gene Ppha_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2005 
Symbol 
ID6462957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2093033 
End bp2093782 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content56% 
IMG OID642728204 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002018834 
Protein GI194337040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGA GTGACAACCA GCGGGAGCGA TACGCCCGCC ACCTTGCACT GCAGGAAATC 
GGCGAAGAGG GGCAGGAAAA ACTGCTTGAA GCGAAAGTAC TGATCATCGG CGCCGGAGGG
CTCGGCTCTC CTGTCGCCTT CTATCTTGCA GCGGCAGGAA TCGGTACCAT CGGACTGATG
GATGGCGACA AGGTCGATCT CAGCAACCTC CAGCGCCAGA TCCTCCATAC CACGGCATCA
ATCGGACAGG AGAAGGTCAA CTCCGCAGAG GAGCGACTGC ACAGCCTTGA TCCCGATATC
AGGCTCACGC TCTATCCCTA TCGACTCACA ACCGACAACG CGCCAAAAAT TATCGCCGGA
TATGACTTCA TCATCGACGC CACCGACAAT TTTGATGCAA AATTCCTGAT TGCACGAGCC
TGCCACCATG CAGCCAAACC CTACTCCCAT GCCGGTATCA GGGAGTTTCA CGGCCAGACC
ATGACCGTTC ATCCCGGCAA AACCGCCTGC TACCAGTGCG TTTTCCACGA AGAGGGAGTC
CCTGCTGCAT CCATCCCGAA AGGGCCACTT GGAGCGCTCC CCGGCCTCAT CGGCAGCATA
CAGGCAACTG AAGCAATAAA AGAGATTCTT TCAATTGGAA CTCCCCTCGT CAATACACTT
CTGACCTGCG ACCTCCTCTC CATGACCATG CGCAGGATCA GCGTTCAGCG TGACCCCTCC
TGCCCGATCT GCGGAGAGCC GCATCAATAA
 
Protein sequence
MPLSDNQRER YARHLALQEI GEEGQEKLLE AKVLIIGAGG LGSPVAFYLA AAGIGTIGLM 
DGDKVDLSNL QRQILHTTAS IGQEKVNSAE ERLHSLDPDI RLTLYPYRLT TDNAPKIIAG
YDFIIDATDN FDAKFLIARA CHHAAKPYSH AGIREFHGQT MTVHPGKTAC YQCVFHEEGV
PAASIPKGPL GALPGLIGSI QATEAIKEIL SIGTPLVNTL LTCDLLSMTM RRISVQRDPS
CPICGEPHQ