Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2005 |
Symbol | |
ID | 6462957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2093033 |
End bp | 2093782 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642728204 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_002018834 |
Protein GI | 194337040 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTGA GTGACAACCA GCGGGAGCGA TACGCCCGCC ACCTTGCACT GCAGGAAATC GGCGAAGAGG GGCAGGAAAA ACTGCTTGAA GCGAAAGTAC TGATCATCGG CGCCGGAGGG CTCGGCTCTC CTGTCGCCTT CTATCTTGCA GCGGCAGGAA TCGGTACCAT CGGACTGATG GATGGCGACA AGGTCGATCT CAGCAACCTC CAGCGCCAGA TCCTCCATAC CACGGCATCA ATCGGACAGG AGAAGGTCAA CTCCGCAGAG GAGCGACTGC ACAGCCTTGA TCCCGATATC AGGCTCACGC TCTATCCCTA TCGACTCACA ACCGACAACG CGCCAAAAAT TATCGCCGGA TATGACTTCA TCATCGACGC CACCGACAAT TTTGATGCAA AATTCCTGAT TGCACGAGCC TGCCACCATG CAGCCAAACC CTACTCCCAT GCCGGTATCA GGGAGTTTCA CGGCCAGACC ATGACCGTTC ATCCCGGCAA AACCGCCTGC TACCAGTGCG TTTTCCACGA AGAGGGAGTC CCTGCTGCAT CCATCCCGAA AGGGCCACTT GGAGCGCTCC CCGGCCTCAT CGGCAGCATA CAGGCAACTG AAGCAATAAA AGAGATTCTT TCAATTGGAA CTCCCCTCGT CAATACACTT CTGACCTGCG ACCTCCTCTC CATGACCATG CGCAGGATCA GCGTTCAGCG TGACCCCTCC TGCCCGATCT GCGGAGAGCC GCATCAATAA
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Protein sequence | MPLSDNQRER YARHLALQEI GEEGQEKLLE AKVLIIGAGG LGSPVAFYLA AAGIGTIGLM DGDKVDLSNL QRQILHTTAS IGQEKVNSAE ERLHSLDPDI RLTLYPYRLT TDNAPKIIAG YDFIIDATDN FDAKFLIARA CHHAAKPYSH AGIREFHGQT MTVHPGKTAC YQCVFHEEGV PAASIPKGPL GALPGLIGSI QATEAIKEIL SIGTPLVNTL LTCDLLSMTM RRISVQRDPS CPICGEPHQ
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