Gene Ppha_2004 details

Gene Information

• Locus tag: Ppha_2004
• Symbol: thiH
• ID: 6462958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 2091942
• End bp: 2093042
• Gene Length: 1101 bp
• Protein Length: 366 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642728203
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_002018833
• Protein GI: 194337039
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGAGA TACCCGACTG GCTCACGGAC AATCGGGAGA CGATGGCGCT TGCCGCCATG 
CTTGCGCCCC CCTATGCATC GGATTCCCTC GAAGCGCTTG CTGCCGAATC GAGAGCGATC 
ACCCTGCGTC GTTTTGGACG CACCATGACG CTCTACGCCC CGCTCTACCT TTCGAACTAC 
TGTTCCAGCG GCTGCGTCTA CTGCGGTTTT GCCTCCGACC GAAAAACTCT GCGCCACCGC 
CTTGAACCCG ATGAGATCGT CCGGGAGCTG AAGGCCATGA AAAAGCTCGG CATCAGCGAC 
ATCCTTCTCC TCACCGGCGA ACGGACAGCC GCTGCCGACT TCGACTACCT CCGAAAAAGT 
GTTGAAATCG CTGCACAGGA GATGCAACGG GTCTCGGTTG AGGCCTTTCC TATGAGCGTC 
AGTGAATACC GCGCACTTGC CGACTGCGGC TGCACCGGCA TCACCATATA CCAGGAGACC 
TACAACCGGG AGCGTTACGA GGCGCTGCAC CGCTGGGGGC CAAAAAAAGA TTATATCGAC 
CGGCTTGAAA CCCCGGCAAG AGCCCTCGAA GGGGGCATAA AAAACGTCGG ACTCGGAGTG 
CTGTTCGGCC TCTCCGATCC GGTTGAAGAT GCTCTGGCCC TCTACCGGCA CCTTCGATAT 
CTTGGCAGAA CCTGGTGGCG TGCAGGCATG TCACTCTCCT TTCCCCGCAT GAGACCCCAG 
ACCGGCGGTT ATGAGCCCCC GTTCCCCGTT GATGACCACC TTCTCGCCCG CATGATCTTT 
GCCTTCCGCA TAGCGCTGCC GGATACGGAG CTGGTTCTCT CAACAAGGGA GAGCGCAGCT 
TACCGCGACG GCATGGCAGG ACTGGGCATT ACCCGAATGA GCATTGAAAG CCGCACCACC 
GTTGGCGGCT ACGATAACCC GGAGAACAAG GAAGAGGGAC AGTTTGAAAT TTTTGACGAC 
CGCACCGCCA AAGAATTTTG CACCGCGCTG CGCAAAAAAA ATATAGAACC TGTCTTTAAA 
AACTGGGAAC CAGCCTATAA TGGTCCGTCT GATGGCAACA AGACAACAAT GCATCATGGA 
GAAGCGGAAA CATGCCATTG A 

 

Protein sequence

MREIPDWLTD NRETMALAAM LAPPYASDSL EALAAESRAI TLRRFGRTMT LYAPLYLSNY 
CSSGCVYCGF ASDRKTLRHR LEPDEIVREL KAMKKLGISD ILLLTGERTA AADFDYLRKS 
VEIAAQEMQR VSVEAFPMSV SEYRALADCG CTGITIYQET YNRERYEALH RWGPKKDYID 
RLETPARALE GGIKNVGLGV LFGLSDPVED ALALYRHLRY LGRTWWRAGM SLSFPRMRPQ 
TGGYEPPFPV DDHLLARMIF AFRIALPDTE LVLSTRESAA YRDGMAGLGI TRMSIESRTT 
VGGYDNPENK EEGQFEIFDD RTAKEFCTAL RKKNIEPVFK NWEPAYNGPS DGNKTTMHHG 
EAETCH