| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1997 |
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| Symbol | |
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| ID | 6462979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2084246 |
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| End bp | 2086471 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728196 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | YP_002018826 |
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| Protein GI | 194337032 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAGCTCTTCT GGTTCTTCTC CTTGCTGTTT CCGAAATGGC TTCAGGCACT
GAAATCCCTC TAAATTCTTC GGCAAACGGA GCAAGTGAGG TCAGCGCCAC TGAAATAACC
GTGACCGGGA AGAAAGGCGA CATTCTGCAA CGCGTAACCG GAAAGGAGTC GGAGCTGCTG
AATCCCTCAC AGATGTCAGT CTACAAGGCG ATCAATCTGA TGCCCTCGCT CAGCCAGCAG
AGTGTTGATC CCTATGGGCT TGCCGATATT GTCAACTATC ATGAATCATT TCGTTTCCGG
GGTGTTGAGG CAACATCCGG TGGTGTTCCG GCCACAACGG TGAACGTTGA AGCTCTTCCG
TTAACGGGAA GACCAGGTGG CGGCGCAACC ATTTACGACC TTGAGAATTT CAGCAATATC
AACATCTATA CCGGTGTCAT GCCCGCCAAT GCAGGACTGG GGCTTGCTGA TGTCGGCGGC
AAAATCAATA TGGAAATCCG TCGCCCCGAA GAGAGCTTTG GTGTGCTTCT CAAGCAGGGA
ATCGGCAGTC AGAATTTTTA CCGCACCTTT ATGCGTATTG ATTCCGGCTC GCTCCCTGGC
AAGGTCAAAA GCTTTATCTC ATTTTCTGAC AGTGCTGCGG ACAAATGGAA AGGCGAGGGT
AACAGCGAGA GAACCAACGT CATGGCAGGA GTGACAAAAG AGTTCAGCGA CAACGTCAAA
CTTGAGACAT TTGTAACCTA CAGCAAGGGA GATATCCATG CCTACAAGCC ACTGAGCTAT
GCTCAACTCT GTAACCCTGA AAGCGCCTAT ACGAATGATT ACGGCACAAA TCCTGACAGT
TATGACTATT ACGGCTACAA CCGTAACAAA TTTGAGGACT GGATGGTGAT GGCCAACCTC
GAGGTCAAAA CAGGCGAGCA TTCGAAACTC AACGTTAAAC CCTACTACTG GAGCGACAAG
GGATACTATC TCGAAACCAT TACCCTTGCC AATAGCCAGA ACCGGATCAG ACGGTGGGAC
ATCGACCACG ATCTCAAGGG AGTTCTTGCC GAGTACACAA CCAGACTCTC CGATATCGAT
CTTGATTTTG GCTACCTCTA TCATACACAG GTTCGTCCCG GTCCACCGAC TTCGTGGAAA
AACTACAAGG TCGTCAACGG CAAGCTGGTT TTTGATCAGT GGAACATTCT CTCAAACAGT
TCAAGCCATG AACTGCACTC CCCTTTTCTT GAGGCGACAT ACCGCTTCGG CGCCTATAAG
CTTGAAGGAG GGGTAAAATA TATCAACTAT ACGCTGCCAT CGATCATTAC CTGCAACACA
ACGGGGGTTG GCGACCTCAG TTACGATGCG GCTCTTGCCA GTGACCCGGC GATCAATACC
AAAGCCAGCG CCCTGGATAC AAAAAGCTTC AGCAGGCTCT TTCCCAATCT GACCCTTACA
AGAACTGTTG GCGATAATGC CACCATTCAT GCCGCATACG GGGAAAACTA TGTAACACAT
GTCGATATCT ATCCCTACTA TATCTCACAG TTCAGCAGTT TTGACAGCAA GGGCATCACC
TTTCAGCAGC TCTGGAGCGA GCGGGAGATG GAAACATCAA AAAATGTCGA ACTCGGCATG
AACGTACAAG GCAGCAACTG GAGCATTGCC CCAACCATCT ACTATGCGCT GCACAAGAAC
AAGCAGGCTG TGCTCTATGA TCCGGCGCTC AATGCAATAT ACCCGATGAA CAATGCCGAT
GCCAGAGGTT ACGGGTTTGA ACTGGAAGCC GAGTACAAGC CTGTTGATAA CCTGAGTTGT
TACGGGTCAT TCTCGTGGAA CAGATTTTCT TTCTCCCAGG AGATCAACTC CGATGCTCCG
GGAGGAGGAA TCATCAAGGT GAAGGGCGAA CAGGTTCCCG ATGCTCCCGA ATTCCTTGCA
AAAGGGATGG TCAGCTACAA AACCGGAAAC CTGACCATAT CGCCCATTGT CCGATACACC
TCTGTTCGTT ATGGCGATGT GCTGCACAAG GAAAAGATTG ACGGAACAAC ACTTTTTGAC
CTCGATCTTA CCTGGAGCAG AAAAATGCCC GGTTTTAAAC AGGTCGATTG CTCACTCTCT
TTCCTGAACA TTTTTGACAA GCAATATGTC AGCATGATCA GTACATCGGA CTACAAAACC
CTGAAAACAT CCTATCAATC CGGAGCGCCA TTTACCATGT TGGCAACGGT TGCATTCCAT
TACTGA
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| Protein sequence | MKKIALLVLL LAVSEMASGT EIPLNSSANG ASEVSATEIT VTGKKGDILQ RVTGKESELL
NPSQMSVYKA INLMPSLSQQ SVDPYGLADI VNYHESFRFR GVEATSGGVP ATTVNVEALP
LTGRPGGGAT IYDLENFSNI NIYTGVMPAN AGLGLADVGG KINMEIRRPE ESFGVLLKQG
IGSQNFYRTF MRIDSGSLPG KVKSFISFSD SAADKWKGEG NSERTNVMAG VTKEFSDNVK
LETFVTYSKG DIHAYKPLSY AQLCNPESAY TNDYGTNPDS YDYYGYNRNK FEDWMVMANL
EVKTGEHSKL NVKPYYWSDK GYYLETITLA NSQNRIRRWD IDHDLKGVLA EYTTRLSDID
LDFGYLYHTQ VRPGPPTSWK NYKVVNGKLV FDQWNILSNS SSHELHSPFL EATYRFGAYK
LEGGVKYINY TLPSIITCNT TGVGDLSYDA ALASDPAINT KASALDTKSF SRLFPNLTLT
RTVGDNATIH AAYGENYVTH VDIYPYYISQ FSSFDSKGIT FQQLWSEREM ETSKNVELGM
NVQGSNWSIA PTIYYALHKN KQAVLYDPAL NAIYPMNNAD ARGYGFELEA EYKPVDNLSC
YGSFSWNRFS FSQEINSDAP GGGIIKVKGE QVPDAPEFLA KGMVSYKTGN LTISPIVRYT
SVRYGDVLHK EKIDGTTLFD LDLTWSRKMP GFKQVDCSLS FLNIFDKQYV SMISTSDYKT
LKTSYQSGAP FTMLATVAFH Y
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