Gene Ppha_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1991 
Symbol 
ID6462991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2077048 
End bp2078181 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content49% 
IMG OID642728190 
Productperiplasmic binding protein 
Protein accessionYP_002018820 
Protein GI194337026 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCATT TTCAGAAAAT CAACGAGAGT GATATGAAGA GGTATAGCAT GAGACTGGTT 
CGATCGAGCA TCCTGGTTAT GCTGGCGCTT TTTGTTACCC TGCTTTCGGC TTACAGCTCC 
ACGGAGAGAA AATTGCCACA CGCCACTTGT GAAGTGACCG ACATGGCCGG ACGGAAAATG 
GTCGTCCCCT CTGTCATCAG GCGTATCTAC GTGAACAAGC CCGGCAGTGT GCTGATGTAT 
GCCGTTGCTC CCGATATGCT TGTCAGTCGA TCGTTATGGC TGACCTATAA CACAAAGCGT 
TATTTGAAAA GCTCTTATCT GCAATTACCC TACGTTGATG GCTCCGTTGA GGAGATTGTC 
AGGCTCAAAC CCGATATCAT CATCTCCAGT TTCAACATTA ATCCAAAAAC AAAAGATGAG 
GCGGAGAGAC TCAGCCAAAA AATTGGTATT CCGGTCTATA TGGTTCCCAT TGATATGGGG 
ATGTATGAGC AGACCTTCAA GGCGCTGGGC GAGCTTCTGA ACCGTAAGGA ACAGACGGGC 
CGGATGAGAG CTTTTCTCCA TACCTGTTTT GACGGGATTG CTCTCAAGTC GAAACAGATA 
CCTGAGAAGC AGCGCGTTCG GGTCTATTAC GCAGAGGGAG AGCGTGGTCT CAATACCGAT 
CCTTCAGCTT CTTTCCATAG CCAGATTCTC GACGTTGTCG GCGCCATCAA CGTCGCTCAG 
GTGGCAGTAG CCTCCGGTCA GGGCATGAGT GCCGTATCCA TGGAACAGCT TTTGTTGTGG 
AATCCCGATG TGGTGCTTGT CTGGACAGGC ATGGGCTCCT CAATGAGCAC CATGCATGCC 
ATCCAGAATG ATAACCTCTG GGCAACAGTG CGGGCGGTTA AAAATAAAAA ACTCTATCAG 
ATACCATTTA TGCCTTTTGG ATGGTTCGAC CGTCCTCCCT CTACCAACAG AATCATGGGG 
GCCATCTGGA CGGCGCAGCA GCTTTATCCC GGCATCTATC ACTACGATCT GAAAAAGGTT 
ACCCGTGAGT ATTTCGACAT TTTTTATCAC TATAAACTGA CTGATGAAGA GCTTGCCGCA 
CTCCTTCACC CCAACCCTCA ACTGCTGATA AATTCGACAT CAGGAAACCA CTAA
 
Protein sequence
MDHFQKINES DMKRYSMRLV RSSILVMLAL FVTLLSAYSS TERKLPHATC EVTDMAGRKM 
VVPSVIRRIY VNKPGSVLMY AVAPDMLVSR SLWLTYNTKR YLKSSYLQLP YVDGSVEEIV 
RLKPDIIISS FNINPKTKDE AERLSQKIGI PVYMVPIDMG MYEQTFKALG ELLNRKEQTG 
RMRAFLHTCF DGIALKSKQI PEKQRVRVYY AEGERGLNTD PSASFHSQIL DVVGAINVAQ 
VAVASGQGMS AVSMEQLLLW NPDVVLVWTG MGSSMSTMHA IQNDNLWATV RAVKNKKLYQ 
IPFMPFGWFD RPPSTNRIMG AIWTAQQLYP GIYHYDLKKV TREYFDIFYH YKLTDEELAA 
LLHPNPQLLI NSTSGNH