Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1990 |
Symbol | |
ID | 6462992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2075960 |
End bp | 2077015 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642728189 |
Product | hypothetical protein |
Protein accession | YP_002018819 |
Protein GI | 194337025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAACA CCGGCGGTGT GCTGGCTGTG TGTGGAGCAC CGCCGCCACT GCACGCAAAA ACCACTGAAA ATGGTGTGCC TCTGCTCAGA AAGGGAGCCC TGAACCTTTA TGTGAATATG CCTTGTCCGC TCAAGGTGGT CGCTAAAATG GCGATTGGTG AATTTGCAGA ACAATACAAT GCTTCGCACG ACATTCAGCT CTATTCACCC ATGCTGCACG ATGGAAATTC AAAAGGCATT GAGGGAGAGC TGAAAGCAGC GCAGTCGGAG GATGAACTGC CTGAAGTGCT GGTTGCCTCA GGTTTGCATA CGGTGCTCTC CCGGCATTTC AAAAAGAGCT TTATCGATAC AGGTATCTAT ACCGGTATCA CCAGCCCTGC AGCGCTGGCG GTTATGCCGG AGAGCTTTCG GAAGCTTGCC ACGGAGCACA ATATCGGGAT TTTTGGTATC GGATACTGGA GTATTGTACT CGATTTATCG ATCAATCCGG TTGAGTCGTA TCCTCGCCGG TGGCGGGATC TGGTTGAGCC GCGTTTCAAG GATCTTGTGA CGGTGCATGG TTACAATGGC AAGGCGAGCA TCGCTACGCT TCTGATGATT CTCAAGGAGC AGCTCGGTAG TGGGGCCGCA ACCGATTTCG CCCGCAATAT TCGTAACATC TGGCATTTCG CTGAAATACT CAAGCGCATC GACTCCTCCG AACCGCGCCG TACCCCCTTC AATCTGCTGC CGAACGCGGC AACGGTGCAG ATGCCGTCAC GCAAAAATGC AGCCATTCTT GAGTTTGAAG ATGGGCCTGT TCTTGCGCCT ATGCTGCTGT TCGTCAAAAC ATCACGAATG GAAGAGTGCC AGCCGATTGT CAACTTTTTT CACACCGATA TTATTCGGCA GGCGTTGAAA AGGGGAGACC TCTCTTTTGC TGAAGATGTT AACTGGCAGG AGCCGTTCAG CTTTCCCTCG TGGGATTATC TGTTGAACAA TGACTATGAA GAGCTGACCG CCATGCTCGA TATTGAACTG AAACAAGGGC TTCGTCCTGA TGCTTTTCAA CTCTGA
|
Protein sequence | MENTGGVLAV CGAPPPLHAK TTENGVPLLR KGALNLYVNM PCPLKVVAKM AIGEFAEQYN ASHDIQLYSP MLHDGNSKGI EGELKAAQSE DELPEVLVAS GLHTVLSRHF KKSFIDTGIY TGITSPAALA VMPESFRKLA TEHNIGIFGI GYWSIVLDLS INPVESYPRR WRDLVEPRFK DLVTVHGYNG KASIATLLMI LKEQLGSGAA TDFARNIRNI WHFAEILKRI DSSEPRRTPF NLLPNAATVQ MPSRKNAAIL EFEDGPVLAP MLLFVKTSRM EECQPIVNFF HTDIIRQALK RGDLSFAEDV NWQEPFSFPS WDYLLNNDYE ELTAMLDIEL KQGLRPDAFQ L
|
| |