Gene Ppha_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1990 
Symbol 
ID6462992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2075960 
End bp2077015 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content51% 
IMG OID642728189 
Producthypothetical protein 
Protein accessionYP_002018819 
Protein GI194337025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA CCGGCGGTGT GCTGGCTGTG TGTGGAGCAC CGCCGCCACT GCACGCAAAA 
ACCACTGAAA ATGGTGTGCC TCTGCTCAGA AAGGGAGCCC TGAACCTTTA TGTGAATATG
CCTTGTCCGC TCAAGGTGGT CGCTAAAATG GCGATTGGTG AATTTGCAGA ACAATACAAT
GCTTCGCACG ACATTCAGCT CTATTCACCC ATGCTGCACG ATGGAAATTC AAAAGGCATT
GAGGGAGAGC TGAAAGCAGC GCAGTCGGAG GATGAACTGC CTGAAGTGCT GGTTGCCTCA
GGTTTGCATA CGGTGCTCTC CCGGCATTTC AAAAAGAGCT TTATCGATAC AGGTATCTAT
ACCGGTATCA CCAGCCCTGC AGCGCTGGCG GTTATGCCGG AGAGCTTTCG GAAGCTTGCC
ACGGAGCACA ATATCGGGAT TTTTGGTATC GGATACTGGA GTATTGTACT CGATTTATCG
ATCAATCCGG TTGAGTCGTA TCCTCGCCGG TGGCGGGATC TGGTTGAGCC GCGTTTCAAG
GATCTTGTGA CGGTGCATGG TTACAATGGC AAGGCGAGCA TCGCTACGCT TCTGATGATT
CTCAAGGAGC AGCTCGGTAG TGGGGCCGCA ACCGATTTCG CCCGCAATAT TCGTAACATC
TGGCATTTCG CTGAAATACT CAAGCGCATC GACTCCTCCG AACCGCGCCG TACCCCCTTC
AATCTGCTGC CGAACGCGGC AACGGTGCAG ATGCCGTCAC GCAAAAATGC AGCCATTCTT
GAGTTTGAAG ATGGGCCTGT TCTTGCGCCT ATGCTGCTGT TCGTCAAAAC ATCACGAATG
GAAGAGTGCC AGCCGATTGT CAACTTTTTT CACACCGATA TTATTCGGCA GGCGTTGAAA
AGGGGAGACC TCTCTTTTGC TGAAGATGTT AACTGGCAGG AGCCGTTCAG CTTTCCCTCG
TGGGATTATC TGTTGAACAA TGACTATGAA GAGCTGACCG CCATGCTCGA TATTGAACTG
AAACAAGGGC TTCGTCCTGA TGCTTTTCAA CTCTGA
 
Protein sequence
MENTGGVLAV CGAPPPLHAK TTENGVPLLR KGALNLYVNM PCPLKVVAKM AIGEFAEQYN 
ASHDIQLYSP MLHDGNSKGI EGELKAAQSE DELPEVLVAS GLHTVLSRHF KKSFIDTGIY
TGITSPAALA VMPESFRKLA TEHNIGIFGI GYWSIVLDLS INPVESYPRR WRDLVEPRFK
DLVTVHGYNG KASIATLLMI LKEQLGSGAA TDFARNIRNI WHFAEILKRI DSSEPRRTPF
NLLPNAATVQ MPSRKNAAIL EFEDGPVLAP MLLFVKTSRM EECQPIVNFF HTDIIRQALK
RGDLSFAEDV NWQEPFSFPS WDYLLNNDYE ELTAMLDIEL KQGLRPDAFQ L