| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1987 |
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| Symbol | |
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| ID | 6462998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2073373 |
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| End bp | 2074251 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728186 |
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| Product | TonB family protein |
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| Protein accession | YP_002018816 |
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| Protein GI | 194337022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG CAGTTCACTT ATTGGCAAGC AAAAAAGGTC GTTGGAAGAG TTGTTTTCCG
GGATTTCGGC CTGGCTTTTT GGGCGAAGAG TTTCTGGATA CCGATTGCTT GCTGAAGCTG
GATTATGGTA ACCTTGTTCT TCGACGGCAG ACACATCTGT TTCTTGGCTG CGGAGTTCTT
GCTTCAACAG CGCTTCTTCT GTTTTTCTGG CTTGTCATCA TCAATTGGGA TTTCATCGCT
TCCGGACAAG GAGTGTCAGG CCGTGCAGTT CCTGGCGACA CCTATGAAAC GCTTACCACC
ATGATAGCGT TTACAGCGCC TCCATCTGCT CCGGAATCAG GGAAAGCTCG CGCAGTGACA
CTCCCTGCGG CCCCCTTCAC GGTTGGAAAA ATTGTCAAGG TCAGGCAGGA GGAGGTGATC
GCTGCACAGC CTGCAGCAAC GCAGAGTGAA CTCAAAGAGC TCAACCGGAA TGAGGAGGCC
CAGGGCGCCC AGAGTACGTC GGGATCTGGT ATTGGTTCCG GTATTGGTTC CGGAAAAGGG
GGTGAATCAT CAGCTCTTGA AGGTTTTGGC GAAGATGGAA CGATTTTTGG AAGATGCGAG
GTAATGCCCG CCTTTCTTGA ACAGAAAAAA CCTCGTTACC CTGAGGCGGC AAGAATCGCG
GGCATTACAG CCAGGCTGTT AGTCAAGGTT TTAATCGGCG CTGACGGCTC TCCTCTCAAG
GCAATGATCA TCAAACGTAT TCCCGAAGAG TGCAATGCGT TTGATGCAGT CACATTGCAA
TCGGTGCTTG AATCAACATA TACCCCGGCT GTTCAGAATG GCAGGGCAGT AAAGGTATGG
TGTATGATTC CAGTCAGTTT CAGGATTGAT GAGTCGTAA
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| Protein sequence | MKNAVHLLAS KKGRWKSCFP GFRPGFLGEE FLDTDCLLKL DYGNLVLRRQ THLFLGCGVL
ASTALLLFFW LVIINWDFIA SGQGVSGRAV PGDTYETLTT MIAFTAPPSA PESGKARAVT
LPAAPFTVGK IVKVRQEEVI AAQPAATQSE LKELNRNEEA QGAQSTSGSG IGSGIGSGKG
GESSALEGFG EDGTIFGRCE VMPAFLEQKK PRYPEAARIA GITARLLVKV LIGADGSPLK
AMIIKRIPEE CNAFDAVTLQ SVLESTYTPA VQNGRAVKVW CMIPVSFRID ES
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