| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1985 |
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| Symbol | |
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| ID | 6463002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2070148 |
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| End bp | 2072100 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642728184 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002018814 |
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| Protein GI | 194337020 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCTC TTGATGACAA GGAGAAGCTT CTGGACAGCC CAGAGGTTTT GCAGGCGTAC
TGCAAGCAGC TCGAGGCGGA GCTGCGGAAG GAACGTTCGC ACCTCGGTTC ACTCTTCGAG
GCCATGCCGG ATATGGCCTG CATCGCTTCG ACGGATGGCT ATTTCAAGCG GCTGAGTACT
TCGTGGGAAG AGGTGCTGGG TTACAGCCAG AGTGAACTGC TCTCAATTTC CTATATGGAG
CTGATCCATC CGGACGACCG GGAATCGACT CTCCGGGAGG TGGAGCAGCA GCTCGCGGGT
AGCAAGACGG CACATTTCGT TAACAGGTAC CGGGCAAAGG ATGGCAGTTA TCGCTGGCTG
GAGTGGAATA CTTCACCTGC GGACGACGGA ACCCTCTTTG CTGTGGCGCG TGACATTACC
GCGCGGCGCG ATGAGGAACG GCAGTTGCTG CTGTGGGCAG ATGCCTTTCG CTATTGTGTA
CACGGACTTG CAGTGGGCGA TCCGGCGACG AATACCATTA CGGCATGTAA TCCTGCCTTT
GCAGCCCTGC ATGGCATGGA GGCTGAAGAG GTGGCGAACC GGGGGATTCT GGATTTTTAC
CCTGCAGAGG TGCATCCCTT TGTGCTTTCG TGCATAGCGC AATTGCAGGA GGCGGCGATG
GTGAGCTTCG AAACCGAGCG CTGTCGAAAG GATGGCTTGT GCTTTCCGGT GCAGATGGAC
GTGGTATGCG TGAAAGACGC AGCCGGGGTG CCGATTTACA CGATAGCCTC CGTACAGGAC
ATTAGGGAGC GCAAACGCTC ACTGGAGGAG CGTTGTCGGC TGGAAACACA ACTGCAACAG
GCGCAGAAGC TGGAGTCGAT CGGCCGGTTG GCCGGAGGTG TAGCGCATGA CCTGAACAAT
CTGCTCACAC CGATACTCGG GTATGCGGAG ATGCTTGAGA TGGAGCTGGC AGGGAATGCA
GGGCAACAGG AGGAGGTCAG GGCAATCCAG CGGGCATCGA CCAGTGCGCG GAAGCTGATC
TGGCAGTTGC TTGCCTTTAG TCGCACCCAG ACGCTGGAGC TTGGGGAGGT TGAACTGAAC
GCCATGCTCA AGGAGTTTGG GGAGATGCTG CGCCAAAGCG TGGGCAGTGG TGTGAGGGTG
GAGTTCGAGC TTGCTCCCTC CCTGCTGCCA TTGCATGCCA ATGCGGGACA GTTGGAGCAG
GTTTTGGTGA ACCTTGCGCT GAATGCGCGT GACGCTATGC CTTCCGGAGG CAGGTTGTGC
TTCAGAACCT CATTCGAGAA GTTGAGCGAA GAGAGGGATG GGCTTCCTCC GGGACGGTAT
GCTGTGCTTG AGGTTGCCGA TACCGGTTGT GGCATCAGGC CGGAGGACAT GCCGAGAATT
TTCGAGCCGT TTTTTACTAC CAAGGGCCCT GGCAAAGGAA CCGGGCTTGG GCTCTCTACG
GTGTACGGTA TCGTGCGACA GCACAGAGGG AATATTGTGG TATCCTGCCC GGAAGGTGAT
GGCTGCTCTT TCAGGGTGTT GCTGCCACTT CTTGATGAGG AGACTGCCGT GCAGAAGGCA
GTGGAGGCCG CTCCAGCCGT GTTGCAACAG AAAGTGCTGG TGGTGGATGA CAACGACTTG
CTGCGCAAGT TCACAGTGCA GGCACTCAAT ATGAAGGGCT ACGAGGTAGC AGATGCACCA
GGTGGAGAGG AGGCGCTCAG GCTGGTGACG AAGGGCCTGT TGAAGCCTGA TCTGGTGATT
ACGGATGTGA TTATGCCGGG CATGAACGGC TGGGAGTTCA GTGAGCAACT GCTGCGATTG
CTGCCGCAGG TGAAGGTGAT CTATATGACC GGTTATGCAA GCGATGTGAT CGAACTGTAT
GGTATTCCGG AGAATGGTCG GGAGCTCTTG TACAAGCCAT TCACGATACA GGTGTTGATG
GAGAAAGTAC AAAGCGTGCT GCAGCGGAAA TAA
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| Protein sequence | MAPLDDKEKL LDSPEVLQAY CKQLEAELRK ERSHLGSLFE AMPDMACIAS TDGYFKRLST
SWEEVLGYSQ SELLSISYME LIHPDDREST LREVEQQLAG SKTAHFVNRY RAKDGSYRWL
EWNTSPADDG TLFAVARDIT ARRDEERQLL LWADAFRYCV HGLAVGDPAT NTITACNPAF
AALHGMEAEE VANRGILDFY PAEVHPFVLS CIAQLQEAAM VSFETERCRK DGLCFPVQMD
VVCVKDAAGV PIYTIASVQD IRERKRSLEE RCRLETQLQQ AQKLESIGRL AGGVAHDLNN
LLTPILGYAE MLEMELAGNA GQQEEVRAIQ RASTSARKLI WQLLAFSRTQ TLELGEVELN
AMLKEFGEML RQSVGSGVRV EFELAPSLLP LHANAGQLEQ VLVNLALNAR DAMPSGGRLC
FRTSFEKLSE ERDGLPPGRY AVLEVADTGC GIRPEDMPRI FEPFFTTKGP GKGTGLGLST
VYGIVRQHRG NIVVSCPEGD GCSFRVLLPL LDEETAVQKA VEAAPAVLQQ KVLVVDDNDL
LRKFTVQALN MKGYEVADAP GGEEALRLVT KGLLKPDLVI TDVIMPGMNG WEFSEQLLRL
LPQVKVIYMT GYASDVIELY GIPENGRELL YKPFTIQVLM EKVQSVLQRK
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