Gene Ppha_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1969 
Symbol 
ID6463028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2053740 
End bp2054630 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID642728170 
Producthypothetical protein 
Protein accessionYP_002018800 
Protein GI194337006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATTA ATCAAGTTCT ACCAACAAAA ACGGCCATTG AACGTGCTGC TGGTATACTC 
GTTACAACTG ACGAAGCCTT TATTGAGAAA GATTGGCATG TGGTTCGAGC GCTTACATTG
CTTAACGGTC TTCACATCCA AGGGTTACAA TTGGCTTTTG GCGGTGGAAC ATCGTTAGCA
AAAGCAGGAC TTATCAAGCG CTTTTCTGAA GATGTTGATT TTAAAGCCAC CATAACCCCT
GCCGGGCACA AGTATTATCG TGAAACTCGC AAGAAAATAA TTGCTGCTCT TGAAGATGGA
GGATTGGTTC TGGTCGCCAA ACCGATGGTA CGCGATGGAA GCAGATTCTT TTCACTTGAA
CTGGATTATG GTGCAACATT TATGCGGAAC CAACGATTGA GAACACATAT CCGTGTTGAG
GTGCGTTTTG TAGCGCCACA AATGCCTGTT GTGTTCAAGC CAGTGCAGTC GCTGTTAAGA
TTTACGGAAG GGCAGCCCGC CGAAATTGGC TCTATGCCAT ATATCGATCC GGTCGAAATC
GCAGCGGACA AGTTAAGTGC GCTTTCGTGG AGATTGTTGG ACGAAGAGGA ACGCCAAGAT
AAAACCCTGA TACGGCACGT TCATGATCTG GCAGCACTTG AAACGTTGAT TGCATCGAAC
GTCAAGTTTC CAGACCTTGT TCGCCAATCC ATTGCTGGCG ATTACAATCG CAGTGATATT
CCTCAAGAAC AGCGGCTTCG TGGCGTTATG ACAAATTTGC AAAATGCCGT ATGGAAAGAA
GCCTATCAAT CGTTCGTGCA GGATATGTCT TTTGCTCGGG ATGATGAAAT CATTCCATAT
GAATCAGCGC TTGATGCGTG TGAGCGTTTG GTTTATCTGG TTGATCGCTA A
 
Protein sequence
MPINQVLPTK TAIERAAGIL VTTDEAFIEK DWHVVRALTL LNGLHIQGLQ LAFGGGTSLA 
KAGLIKRFSE DVDFKATITP AGHKYYRETR KKIIAALEDG GLVLVAKPMV RDGSRFFSLE
LDYGATFMRN QRLRTHIRVE VRFVAPQMPV VFKPVQSLLR FTEGQPAEIG SMPYIDPVEI
AADKLSALSW RLLDEEERQD KTLIRHVHDL AALETLIASN VKFPDLVRQS IAGDYNRSDI
PQEQRLRGVM TNLQNAVWKE AYQSFVQDMS FARDDEIIPY ESALDACERL VYLVDR