Gene Ppha_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1959 
Symbol 
ID6463066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2046338 
End bp2047504 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content49% 
IMG OID642728162 
Producthypothetical protein 
Protein accessionYP_002018792 
Protein GI194336998 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC TGAAGCGCTT GATAACAACC GAGGTCGAGA ACGGGCTGAA GAATTCCCCG 
GTCACCGCAG TTATCGGGCC AAGACAATGT GGAAAATCAA CCCTGACACG CCATCTTCTG
ACCTACAATC GTCCATTTCT CTACCTCGAT CTTGAAAAGC CCTCCGACCT GCGAAAACTC
GAAGAGCCGG AATGGTTTTT TATCTCGCAA AAGGAAAAGC TGATCTGCAT TGATGAAGTA
CAACGAAAAC CCGATCTCTT TCCCCTTATC CGCAGCATGG TGGATGATTG GGGTGAAAAT
GGCCACTTTC TTGTTCTCGG TTCAGCCTCC CGTGATCTTC TAAGGCAGAG TTCGGAATCA
CTTGCCGGAC GCATTACCTA CAAGCAGTTG ACCCCTTTTT TGTGGGAGGA GGTTAACGAT
CATGTCTCAT ACGAGCACTA TCTCACCGTT GGCGGCTTCC CGCGAAGTCT GCTGCAAAAG
ATACCGGAAG TTTCATATCA GTGGCGGGAA GATTTTATTG CAACCTTCCT TGAGCGCGAT
CTACTGCAAT GGAGCGGTTT TTCACCACAG ACCATGCGAC GATTGTGGCT GATGCTGGCC
CATAACAACG GACAGACCGT GAACCTCTCG ACAATCGGTG GTTCTCTCGG AATCAGCCAC
ACCACCGTGC GAAACTACCT TGATTTGCTG CAGGAGACCT TTATGGTGCA CATCCTGCCG
CCGTTCATCT CCAATACCGG CAAGCGCCTG ATCAAAACAC CCAAAGTCTA TATTACTGAC
ACCGGCATTA TTTCTGCGCT GCTTGGATTG TACGATTTCA ATCAACTTGC AGGCCATCCG
GTTTTCGGTT CATTATGGGA GAGCACGGTG ATTACCAATC TCAAAGGGAT ATTTCCGCGT
GCAGAACTCT CATTTTACAG AACCTCCAAC GGAACAGAAA TCGACATCCT GTTCCAGCTT
TCAGGAAGCC TGCTTGCCAT TGAGTGCAAG GCATCCGCAG CGCCAACACT TTCAAGAGGG
AATTATTCTG CAATAGAGGA CATTGCACCC TTACATACAT TCATTGTCGC CCCGATTTCA
CAGAGCTACC CGCTCAAACA GGGATTCTCC GTTGTGACGC TCACTGATCT TTTCAAGGAA
ATACGGGAGT ACATCAAAAG CACCTGA
 
Protein sequence
MKYLKRLITT EVENGLKNSP VTAVIGPRQC GKSTLTRHLL TYNRPFLYLD LEKPSDLRKL 
EEPEWFFISQ KEKLICIDEV QRKPDLFPLI RSMVDDWGEN GHFLVLGSAS RDLLRQSSES
LAGRITYKQL TPFLWEEVND HVSYEHYLTV GGFPRSLLQK IPEVSYQWRE DFIATFLERD
LLQWSGFSPQ TMRRLWLMLA HNNGQTVNLS TIGGSLGISH TTVRNYLDLL QETFMVHILP
PFISNTGKRL IKTPKVYITD TGIISALLGL YDFNQLAGHP VFGSLWESTV ITNLKGIFPR
AELSFYRTSN GTEIDILFQL SGSLLAIECK ASAAPTLSRG NYSAIEDIAP LHTFIVAPIS
QSYPLKQGFS VVTLTDLFKE IREYIKST