Gene Ppha_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1949 
SymbolnifH 
ID6463120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2036852 
End bp2037676 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID642728152 
Productnitrogenase reductase 
Protein accessionYP_002018782 
Protein GI194336988 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00645764 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG TAGCTATTTA CGGAAAAGGT GGCATCGGCA AGTCAACCAC GACACAAAAC 
ACGGTTGCCG GTCTTGCGGA AATGGGCAAG AAAATCATGG TTATTGGCTG TGACCCGAAG
GCTGACTCTA CCCGTCTGCT ACTCGGTGGA CTGCAGCAGA AGACCGTGCT CGACACACTT
CGCGAGGAGG GTGAAGAAGT TGAACTTGAA GATATCATCA AAGATGGTTA CAGAAATACC
CGTTGCACCG AATCCGGTGG TCCTGAACCA GGCGTAGGCT GCGCAGGTCG TGGTATCATA
ACCTCTGTTA ACCTTCTCGA ACAGCTTGGC GCTTTTGATG ATGAATGGGA TCTCGATTAT
GTCTTCTACG ATGTGCTTGG TGACGTTGTA TGCGGAGGAT TCGCCATGCC GATCCGCGAC
GGTAAAGCTG AGGAGATCTA CATCGTCTGT TCGGGTGAAA TGATGGCCAT GTACGCTGCC
AACAACATCT GTAAAGGTAT CCTGAAATAT GCCGATACCG GTGGAGTTCG CCTTGGTGGC
CTTATCTGCA ACAGTCGTAA TGTTGATAAC GAACGCCAGA TGATTGAAGA GTTGGCCAAA
AAAATCGGTA CGCAGATGAT CCATTTTGTA CCGAGGAACA ACTTTGTGCA GCGTGCCGAG
ATCAACCGTA AAACCGTTAT CGAGTACGAT CCAACTCATG AGCAGGCAGA TGAATACAGG
GCTCTTGCAC AGAAAATCAA CGATAACAAG ATGTTTGTCA TCCCCAAGCC GCTTGAGATC
GAAGAACTGG AAGCTCTTCT CATTGAATTT GGTATCGCTA ACTAA
 
Protein sequence
MRKVAIYGKG GIGKSTTTQN TVAGLAEMGK KIMVIGCDPK ADSTRLLLGG LQQKTVLDTL 
REEGEEVELE DIIKDGYRNT RCTESGGPEP GVGCAGRGII TSVNLLEQLG AFDDEWDLDY
VFYDVLGDVV CGGFAMPIRD GKAEEIYIVC SGEMMAMYAA NNICKGILKY ADTGGVRLGG
LICNSRNVDN ERQMIEELAK KIGTQMIHFV PRNNFVQRAE INRKTVIEYD PTHEQADEYR
ALAQKINDNK MFVIPKPLEI EELEALLIEF GIAN