Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1949 |
Symbol | nifH |
ID | 6463120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2036852 |
End bp | 2037676 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728152 |
Product | nitrogenase reductase |
Protein accession | YP_002018782 |
Protein GI | 194336988 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00645764 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG TAGCTATTTA CGGAAAAGGT GGCATCGGCA AGTCAACCAC GACACAAAAC ACGGTTGCCG GTCTTGCGGA AATGGGCAAG AAAATCATGG TTATTGGCTG TGACCCGAAG GCTGACTCTA CCCGTCTGCT ACTCGGTGGA CTGCAGCAGA AGACCGTGCT CGACACACTT CGCGAGGAGG GTGAAGAAGT TGAACTTGAA GATATCATCA AAGATGGTTA CAGAAATACC CGTTGCACCG AATCCGGTGG TCCTGAACCA GGCGTAGGCT GCGCAGGTCG TGGTATCATA ACCTCTGTTA ACCTTCTCGA ACAGCTTGGC GCTTTTGATG ATGAATGGGA TCTCGATTAT GTCTTCTACG ATGTGCTTGG TGACGTTGTA TGCGGAGGAT TCGCCATGCC GATCCGCGAC GGTAAAGCTG AGGAGATCTA CATCGTCTGT TCGGGTGAAA TGATGGCCAT GTACGCTGCC AACAACATCT GTAAAGGTAT CCTGAAATAT GCCGATACCG GTGGAGTTCG CCTTGGTGGC CTTATCTGCA ACAGTCGTAA TGTTGATAAC GAACGCCAGA TGATTGAAGA GTTGGCCAAA AAAATCGGTA CGCAGATGAT CCATTTTGTA CCGAGGAACA ACTTTGTGCA GCGTGCCGAG ATCAACCGTA AAACCGTTAT CGAGTACGAT CCAACTCATG AGCAGGCAGA TGAATACAGG GCTCTTGCAC AGAAAATCAA CGATAACAAG ATGTTTGTCA TCCCCAAGCC GCTTGAGATC GAAGAACTGG AAGCTCTTCT CATTGAATTT GGTATCGCTA ACTAA
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Protein sequence | MRKVAIYGKG GIGKSTTTQN TVAGLAEMGK KIMVIGCDPK ADSTRLLLGG LQQKTVLDTL REEGEEVELE DIIKDGYRNT RCTESGGPEP GVGCAGRGII TSVNLLEQLG AFDDEWDLDY VFYDVLGDVV CGGFAMPIRD GKAEEIYIVC SGEMMAMYAA NNICKGILKY ADTGGVRLGG LICNSRNVDN ERQMIEELAK KIGTQMIHFV PRNNFVQRAE INRKTVIEYD PTHEQADEYR ALAQKINDNK MFVIPKPLEI EELEALLIEF GIAN
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