Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1916 |
Symbol | |
ID | 6463204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2008964 |
End bp | 2009278 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642728125 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002018755 |
Protein GI | 194336961 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00193475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCT ACACATTAGA CGAAGTTCAG GATAAACTTA TTGGCAAACA TGGTACCCCG GAGCGGGAGA GGTTTGAGTA TGAATTACAA ATGGACTTGA TTGGGCAAGC CATCAAGCAG ACTCGCCAGG AACGCAATTT AACCCAGGAA GCATTGGGCA AACTTATTGG TGTTCAAAAG TCACAGATAT CAAGGATTGA AAGTAATGCG AGCAATGTTA CCATTGACAC CCTGATGCGC GTTTTCAATG CCTTGCAGGC AAAAGTAAAA TTTCAGGTTG AGCTGCCACA CTGCAAAATC AGTGTAGGCC AGTAA
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Protein sequence | MKTYTLDEVQ DKLIGKHGTP ERERFEYELQ MDLIGQAIKQ TRQERNLTQE ALGKLIGVQK SQISRIESNA SNVTIDTLMR VFNALQAKVK FQVELPHCKI SVGQ
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