Gene Ppha_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1912 
Symbol 
ID6463211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2002819 
End bp2003304 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID642728121 
Producthypothetical protein 
Protein accessionYP_002018751 
Protein GI194336957 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.441349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT TTCTCTCATC AAGCCGTTAC CTTATCCTGA TTGCTGTTGC CGGAACATTC 
CTTGCTGCCA GCACTTTGTT GCTCTACGGT GGCATTTCCG TTTTTCAGCA GATCATCTAT
ACCGTTATGG AGAGCTCGGT CAGCTCCAAA GGGGCAAAGG TGCTTATGCT CGGATTCATA
GAAAACGCGG ATATCTTCCT TGTGGGAACA GCCCTCTATA TCATGTCACT GGGGTTGTTC
GAGCTCTTTA TTGACGATTC CATAGAACTT CCCGAATGGC TTGTCATTCA TACGCTCGAC
GACCTCAAAG AGAAGCTAAT CGGCGTGATT GTTGTTGTTA TGGCTGTTGT CTTTCTCGGC
CACGTCGTAA ACTGGCATGG TGAAACCGAA ATTCTTTACC TTGGTGGAGC CATAGGTCTT
GTTGTCGTCG GACTGACCTA TTTTACCGAA CACAAGAAAA AAGCGCCTTA CGAAAAGAAA
CCGTAA
 
Protein sequence
MNRFLSSSRY LILIAVAGTF LAASTLLLYG GISVFQQIIY TVMESSVSSK GAKVLMLGFI 
ENADIFLVGT ALYIMSLGLF ELFIDDSIEL PEWLVIHTLD DLKEKLIGVI VVVMAVVFLG
HVVNWHGETE ILYLGGAIGL VVVGLTYFTE HKKKAPYEKK P