Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1912 |
Symbol | |
ID | 6463211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2002819 |
End bp | 2003304 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642728121 |
Product | hypothetical protein |
Protein accession | YP_002018751 |
Protein GI | 194336957 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.441349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAT TTCTCTCATC AAGCCGTTAC CTTATCCTGA TTGCTGTTGC CGGAACATTC CTTGCTGCCA GCACTTTGTT GCTCTACGGT GGCATTTCCG TTTTTCAGCA GATCATCTAT ACCGTTATGG AGAGCTCGGT CAGCTCCAAA GGGGCAAAGG TGCTTATGCT CGGATTCATA GAAAACGCGG ATATCTTCCT TGTGGGAACA GCCCTCTATA TCATGTCACT GGGGTTGTTC GAGCTCTTTA TTGACGATTC CATAGAACTT CCCGAATGGC TTGTCATTCA TACGCTCGAC GACCTCAAAG AGAAGCTAAT CGGCGTGATT GTTGTTGTTA TGGCTGTTGT CTTTCTCGGC CACGTCGTAA ACTGGCATGG TGAAACCGAA ATTCTTTACC TTGGTGGAGC CATAGGTCTT GTTGTCGTCG GACTGACCTA TTTTACCGAA CACAAGAAAA AAGCGCCTTA CGAAAAGAAA CCGTAA
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Protein sequence | MNRFLSSSRY LILIAVAGTF LAASTLLLYG GISVFQQIIY TVMESSVSSK GAKVLMLGFI ENADIFLVGT ALYIMSLGLF ELFIDDSIEL PEWLVIHTLD DLKEKLIGVI VVVMAVVFLG HVVNWHGETE ILYLGGAIGL VVVGLTYFTE HKKKAPYEKK P
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