Gene Ppha_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1907 
Symbol 
ID6463227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1993077 
End bp1993391 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID642728117 
ProductDNA photolyase, class 2 
Protein accessionYP_002018747 
Protein GI194336953 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC CGCGCCGCAT CCGCCTCCTG AACGAGAAGC ATGACGGAGA GGGTGCGGTG 
ATCTACTGGA TGTCGCGCGA CCAGAGGGTG CGTCATAACT GGGCGCTGCT CTTTGCCCGC
AGAAAAGCGG AACTCCTGCA GCAGCCTCTT GTGGTGCTCT TTACGCTTGC TCCCACTTTT
CTCGGGGCCC CGCTCCGCCA TTACGATTTC ATGCTCAAGG GCTTGCGGGA GGTTGAAGCC
GATCTCAAAA CACTCAACAT TCCCTTTTTG CTCCTCCAGA GCCAGCCGCC AAAACGCACG
ACAAGCACTG TCTAA
 
Protein sequence
MIDPRRIRLL NEKHDGEGAV IYWMSRDQRV RHNWALLFAR RKAELLQQPL VVLFTLAPTF 
LGAPLRHYDF MLKGLREVEA DLKTLNIPFL LLQSQPPKRT TSTV