Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1907 |
Symbol | |
ID | 6463227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1993077 |
End bp | 1993391 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642728117 |
Product | DNA photolyase, class 2 |
Protein accession | YP_002018747 |
Protein GI | 194336953 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGATC CGCGCCGCAT CCGCCTCCTG AACGAGAAGC ATGACGGAGA GGGTGCGGTG ATCTACTGGA TGTCGCGCGA CCAGAGGGTG CGTCATAACT GGGCGCTGCT CTTTGCCCGC AGAAAAGCGG AACTCCTGCA GCAGCCTCTT GTGGTGCTCT TTACGCTTGC TCCCACTTTT CTCGGGGCCC CGCTCCGCCA TTACGATTTC ATGCTCAAGG GCTTGCGGGA GGTTGAAGCC GATCTCAAAA CACTCAACAT TCCCTTTTTG CTCCTCCAGA GCCAGCCGCC AAAACGCACG ACAAGCACTG TCTAA
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Protein sequence | MIDPRRIRLL NEKHDGEGAV IYWMSRDQRV RHNWALLFAR RKAELLQQPL VVLFTLAPTF LGAPLRHYDF MLKGLREVEA DLKTLNIPFL LLQSQPPKRT TSTV
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