Gene Ppha_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1906 
Symbol 
ID6463228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1992347 
End bp1993063 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content53% 
IMG OID642728116 
Productglutamine amidotransferase class-I 
Protein accessionYP_002018746 
Protein GI194336952 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAA AAGTACTGAT TGTCAAAAAC ATCACCCACG AAGGGCCGGG TCTGCTTGAA 
ACCCTGCTTT GCGAGCATGG TATCGCATGG CATAGTGAGG ATCTTTCTGC GGGCGGAACC
GTTCCCGATC CACGTGGCTA CAGCGCACTC GTGGTGCTTG GAGGGCCCCA GAGCGCCAAC
GATGAGAGTC CTGCCATGCT GCTTCAGCTC CGCCGGATTG AGCAGGCTCT GCATGAGGAG
ATCCCCTCTC TTGGCATCTG CCTTGGCATA CAGTGCCTTG TTAAAGCGGG TGGAGGAAAA
GTGGTGAACT CTCCGGTAAA AGAGATTGGA TTTCTTGATC CTGAAGGGAA TCCCTTCCGC
ATCGACCTTA CCCCGGCGGG CAAAAAGGAG GCTCTTTTTG GCGGGCTTGG CAAAAGCTTT
CCGGTCTTTC AGCTTCATGG CGAAACGGTG GAGCTTGCAT CTTCAGGAAT GGAGCTGCTT
GCGACCGGCA AACAATGTCC TGTGCAGGCT GTCAGGGTTG GCAAAAACGC CTACGGACTG
CAGTGTCATT TTGAACTGAC AACTGCGATG TTTTCGGATT GGTGCGATAC GGATAGTGAC
CTGAAAAGAA TGAATCGTCA GGAACTCATG GAACAGTATG AAACGATCAG AGAGGAGTAC
CATTCGACCG GACTCAAGCT CATGCACAAC TTCCTCCGGA TTTCAGAACT TGTCTGA
 
Protein sequence
MSRKVLIVKN ITHEGPGLLE TLLCEHGIAW HSEDLSAGGT VPDPRGYSAL VVLGGPQSAN 
DESPAMLLQL RRIEQALHEE IPSLGICLGI QCLVKAGGGK VVNSPVKEIG FLDPEGNPFR
IDLTPAGKKE ALFGGLGKSF PVFQLHGETV ELASSGMELL ATGKQCPVQA VRVGKNAYGL
QCHFELTTAM FSDWCDTDSD LKRMNRQELM EQYETIREEY HSTGLKLMHN FLRISELV