| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1900 |
|---|
| Symbol | |
|---|
| ID | 6463243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1987602 |
|---|
| End bp | 1987994 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642728108 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_002018740 |
|---|
| Protein GI | 194336946 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCT ATAAACTTGT TCTACCCGAA CATCTTAACC ATTACGGCTT TCTGTTCGGC
GGCAACCTTT TGAAATGGAT TGACGAAATT GGCTATATCA CAGTCTCTCT GGATTATCCC
GGCTGCAACT TTGTGACCGT CGGTATGGAT AAGGTGGAAT TCAAAAAAAG CATTCGGGGC
GGTTCTATCC TCTGTTTTGT GACTGAAAAA AACAAAATCG GTCACACATC GATTGAGTAC
ACCGTGCGTG TCTACAAGAA AAGTATTGAG AGCGGTGAAC GGGTTATGGC TTTCAGTACG
CACATCACCT TTGTCTGTCT TGATGACAAG GGGGCAAAAA AAGAGCTCTG CTGCGGCTAT
AAAGAGAAGG GTGAAGACAA TAACTGCCTC TGA
|
|---|
| Protein sequence | METYKLVLPE HLNHYGFLFG GNLLKWIDEI GYITVSLDYP GCNFVTVGMD KVEFKKSIRG
GSILCFVTEK NKIGHTSIEY TVRVYKKSIE SGERVMAFST HITFVCLDDK GAKKELCCGY
KEKGEDNNCL
|
|---|
| |