| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1893 |
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| Symbol | |
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| ID | 6463257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1981661 |
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| End bp | 1982071 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728104 |
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| Product | UspA domain protein |
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| Protein accession | YP_002018736 |
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| Protein GI | 194336942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.125519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGTTT ACCGGGAGAT TCTTGTTGCC ATCGACTGCT CGCCGGTTGA TGATTTTCTT
GTCGAACAGG TATCGGCGCT TGCCCTGCAG CTTGGCGCCA CGCTGCATCT GCTGCATGTT
GTCCATTCCC ACACCCTCGA CCAGGAGCGC TTTCTTCGTT CAGAGACAAC GCGTATTCTC
GATCAATATC GCCAGAAACT GGAGGCAGAG GGGATTGGGG TGCGTGTGGT GATCAGGAGC
GGAGAGCCGG AGCAGGAGAT TCTCAGGGAG ATTGAGGAGA GGCATTATGA TCTTGTGGCA
ATGGCTGCCC ATGGTCACAG TTTGCCGGAA AGAATTCTTT TCGGCAGCGT TTCAAGAACT
CTGAGGCAAA ATATCTCCAT CCCGTTGTTG CTGATCAAAC AGGATCGCTG A
|
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| Protein sequence | MKVYREILVA IDCSPVDDFL VEQVSALALQ LGATLHLLHV VHSHTLDQER FLRSETTRIL
DQYRQKLEAE GIGVRVVIRS GEPEQEILRE IEERHYDLVA MAAHGHSLPE RILFGSVSRT
LRQNISIPLL LIKQDR
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