| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1887 |
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| Symbol | |
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| ID | 6463267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1975204 |
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| End bp | 1977183 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728098 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002018730 |
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| Protein GI | 194336936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.114905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATGA GTGCAAAAGC TGCAGGTATA TCTGTTCCTG CCGTTGAACG ACGGCTCAGT
GATATAGATT TTCAGTCTCT CGTTGAAAAA CGTCCTTTTT ATCCCTCCCC AGCCTCATGG
TCGGATGAGG TGCTCTATTT TCTTTTTCTT GACCGTTTTT CTGATGGCCG GGAGTATGGT
GGATTTGGTG ATACAAAAGG GAGGCCGGTG GCCAGGCACT CGGGAAAACG TACGACTCCA
CCCTTTAACC CCCTGACCGA CAGTGGTACG GCGGAATGGA CGAGTTGGTT TGAATCAGGA
AAACAGTGGT GTGGCGGTAC CATTGCCGGG ATGAAGAAGA AACTTGGTTA TCTCAAGAGG
CTTGGCATAA CGGCTATCTG GGTCAGTCCT GTTTTCCGGC AGGTAACGGG AAGTAACGAT
TATCATGGGT ACGGTATCCA GAATTTTCTT GATGTTGATC CTCATTTCGG TAGCAGAGAG
GAGCTGAAGG AGTTTGTGAA GGCGGCGCAC GAGCTTGACA TCAGGGTGAT TCTTGATATC
ATCATCAATC ATGCTGGTGA CGTTTTTGCT TACGAGGGTA ATCAGCGCCA TTTTTATTCG
GAAGGAAGAG AGTGGCCGGT CAGCGGTTAC CGGCTTTCCA GTGGTGAGGC GGGCAGCATT
CCCTTCAACA CAGCTCCAGC CTGTTTTGAG AACGGAGCCT GGCCTGACGG GGCTGTCTGG
CCTGAGGAGC TGCAGTCACC CGATACCTGG ACCTGTCATG GAGAGATCAT GCAGTGGGAC
TCTTTTCCTG AGTTTCTTGA TGGTGATTTT TGTTCGCTCA AGGATATTCA TCTTGGAGAT
GCCCTTCGTG ATCCTTTTGT CGTTCAGGAT ATCGAACGGC GTGTCAAGGA GTTTACCCCT
TCTCTGGCGC TTCGTTATTT GACCGATGTC TATCGCTTCT GGATTGCTTT TGCCGATCTT
GACGGATTCC GGCTTGATAC GGTCAAGCAT ATGGAGCCGG GGGCGGTGAG GTTTTTTGCG
ACCGCTATCC ATGAATTTGC TGAATCAATC GGTAAGGAAA ATTTTACGAT TATTGGTGAA
ATCACAGGTG GTCGTTCTTA TGCGGCAACC ATTCTTGATA CTACCGGTCT TGATGCTGCG
CTTGGTATTG ATGATCTTCC CGATAAACTT GAGTTTCTGG TCAAAGGGTG GAGGAGCCCC
GGAAATCCCG AAACGGCAGA GCAGGAGGGT TATTTCGATC TTTTCCGCAA CAGTATTCTC
GATAACCGAA GGAGCCATCA ATGGTATTCA AAGCATATTG TCACCATGCT TGATGATCAT
GACCAGGTTG GCGTCAATCA CAAGTTTCGT TTTGCCGGTG ATGCTGCCCG AAGCGCCCGT
CTGCTTCCTG CAGCGCTTGG TCTTAACCTG ACCTCAGCGG GTATTCCCTG CATTTATTAC
GGTACAGAAC AGGGCTTTAA CGGCGCTGAT CCCCGTACGG ATGACAACTC CTATAGTGAT
GTGTTTCTGC GGGAGTGCAT GTTTGGAGGT GATTTCGGCT CCTTCAGGAG TAGCGGAAAA
CACTTTTTTA ATGAGAAGAA CGAGATTTAC CGCTTTGTGC AGAAAGTAAT CCGTCTGCGT
CGCGAGCATC TTGAGCTTTC CCGTGGCCGG CAATATCTGC GGCCTGTGTC GGAGAGTGGT
CGTGATGGTG AATTTTACTA TCCTCAGCCA GTCAATGGTG AATTGCACTG GGTGATTGCC
TGGTCACGAA TTTTTGCCGG TTCGGAATCT CTTTGTGCAA TCAATACCGA TACCGAGCGC
GAGCTTACCC TCTGGATTGT GGTAGACAGC GCTATTCATG CAGCGGGAAG TACCATGAAC
TGCCTTTTTT CTACTGATGC TCTTCAGCTT GGCCGCAGTG TTTCTGTTAT GCCAATTGAG
GGTTCTGCGG TACAAATTAC GGTACCAGCG GCAGGGTTTG TGGTCTACGG TCAAGGGTGA
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| Protein sequence | MIMSAKAAGI SVPAVERRLS DIDFQSLVEK RPFYPSPASW SDEVLYFLFL DRFSDGREYG
GFGDTKGRPV ARHSGKRTTP PFNPLTDSGT AEWTSWFESG KQWCGGTIAG MKKKLGYLKR
LGITAIWVSP VFRQVTGSND YHGYGIQNFL DVDPHFGSRE ELKEFVKAAH ELDIRVILDI
IINHAGDVFA YEGNQRHFYS EGREWPVSGY RLSSGEAGSI PFNTAPACFE NGAWPDGAVW
PEELQSPDTW TCHGEIMQWD SFPEFLDGDF CSLKDIHLGD ALRDPFVVQD IERRVKEFTP
SLALRYLTDV YRFWIAFADL DGFRLDTVKH MEPGAVRFFA TAIHEFAESI GKENFTIIGE
ITGGRSYAAT ILDTTGLDAA LGIDDLPDKL EFLVKGWRSP GNPETAEQEG YFDLFRNSIL
DNRRSHQWYS KHIVTMLDDH DQVGVNHKFR FAGDAARSAR LLPAALGLNL TSAGIPCIYY
GTEQGFNGAD PRTDDNSYSD VFLRECMFGG DFGSFRSSGK HFFNEKNEIY RFVQKVIRLR
REHLELSRGR QYLRPVSESG RDGEFYYPQP VNGELHWVIA WSRIFAGSES LCAINTDTER
ELTLWIVVDS AIHAAGSTMN CLFSTDALQL GRSVSVMPIE GSAVQITVPA AGFVVYGQG
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