| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1884 |
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| Symbol | |
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| ID | 6463274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1971661 |
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| End bp | 1973112 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728095 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002018727 |
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| Protein GI | 194336933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTTG TATATTCTTT CGTGCCGTTG CGTTTCCAGA AAGCTGGAGG CAAGTTTTTT
TTCATCAAGA CTGACCCGTT TATGAACAGG ATGAGACTGA TACTTTTGTT GCTGCTGACT
GTCCTTGTGC TCACCTCTCC CTTGTCGTTG CATGCTGCCG CCGCTGCGGG GGAGACAAAA
TCAATAACCC TTGACGATGC CGTGCGTATC GGGCTTGAGA GAAGTCGTAT GCTTGAAATT
GCGCGGCTTG ACAGGGATAT GGCCGGGCAA AAAATCCGGG AGACATGGTC GGAGGTGCTG
CCTCAGCTTA CAACCGGATT TACCTATACC CGCACACTGA AATCCTCCGT GCTGCTCTTG
CCACCGGGCC AGGGTTTTCC CAGCACACTC GAAACAAGTT CCGATAATGC CGGACACGCT
ACCCTTGATC TTCGTCAGCC AATTTTCAAT GTATCTGCTT TTACCGGTAT CAAAGCGGCA
AGTATTGTCC GGAAGATGAG CGAGGCAGCT TACCTGAATG CTGAAGCGTC CGTCGTTGCC
GACATCAAGA TCTCCTATTT TGATGCCCTC ATTTCCAAAG ATCAGTTGAA GCTCATTGAG
CAGAGTATTG ACCGCTGGGA GCAGTCAAGA AAGGATACTC GCGCCATGTT CCGTCAGGGT
ATTGCCGCTG ATATCGATAC CCTCAAGGCC TTTCTCTCGG TTGAAAATCT TCGCCCCGAT
CTTCTGCAAG CGCAAAACCG GGTGGCGATT ACCATGACCA AGCTGAAAAA TGTGATGGGA
GTTCCTGCCG ACAGCAGCAT CGTGCTGAGT GGCAAGCTTG AACTCTCTTC GGCCACCTAT
CCTGCGGATA TTGCTGCGGC ATATCGTGAA GCGCTTGATG CAAGGCCCGA TCTTCGCCAG
CTTGATTTTC AGGTCAAGGC AGAGGGTGAA AAAGTCAGCG CTGTGCGTGC CGAACGCTTT
CCTGTGATCT CGGCATTCGG CAAGCTGGAG ACGCAAACAG CATTTAATGA TGATGTCCGT
ACCGTTGATT CGGTTTGGCC ATCCTCCTCT TCAGTTGGCC TTCAGTTCAC CATGCCGATT
TTTACAGGGT ATCGCATCAG CTCCCAGGTT GAGCAGGCAA AGATAGCCCA ACTGCAGACC
CGCACAAGGC TTGAAGATTT GAGGGCAAAC ATCAGGGCTG AAATTGAGGT TCGGGTATTA
AATTTCAGGG AGTCGCAAAA GAGAATTGAG GTGCAGTCCC AAACCATAGG TGTTGCGGAA
CGCAGTTACA GCATATCGCT CCTCCGTTTC AAGGAGGGTA TTGGCTCCCG TCTTGAGTTA
ACGGATGCCG AACTCCAGCT CAACAAGGCA AAAACCAACT ATCTGCAGGC CGTTTACGAC
TATCTTGTAG CAGGCGTTCA GCTCGAAAAG GCCTTGGGGC GTTCACGTGT TGAGGTTGCT
TTACAGGGTT GA
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| Protein sequence | MLFVYSFVPL RFQKAGGKFF FIKTDPFMNR MRLILLLLLT VLVLTSPLSL HAAAAAGETK
SITLDDAVRI GLERSRMLEI ARLDRDMAGQ KIRETWSEVL PQLTTGFTYT RTLKSSVLLL
PPGQGFPSTL ETSSDNAGHA TLDLRQPIFN VSAFTGIKAA SIVRKMSEAA YLNAEASVVA
DIKISYFDAL ISKDQLKLIE QSIDRWEQSR KDTRAMFRQG IAADIDTLKA FLSVENLRPD
LLQAQNRVAI TMTKLKNVMG VPADSSIVLS GKLELSSATY PADIAAAYRE ALDARPDLRQ
LDFQVKAEGE KVSAVRAERF PVISAFGKLE TQTAFNDDVR TVDSVWPSSS SVGLQFTMPI
FTGYRISSQV EQAKIAQLQT RTRLEDLRAN IRAEIEVRVL NFRESQKRIE VQSQTIGVAE
RSYSISLLRF KEGIGSRLEL TDAELQLNKA KTNYLQAVYD YLVAGVQLEK ALGRSRVEVA
LQG
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