Gene Ppha_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1883 
Symbol 
ID6463281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1970423 
End bp1971532 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content42% 
IMG OID642728094 
Producthypothetical protein 
Protein accessionYP_002018726 
Protein GI194336932 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAA GACTTTATGT ACACAACTAC AGATGTCTGG AAAATTTTGA GCTTAATTTA 
AAAGAATTCC AATCAGCTCT TCTTATCGGA AAAAACGGTT CAGGTAAATC CACCATATCG
TATGTGCTGG AGCTGTTTCA ATCTATCGGC AGAGGTGTAA ACAGAGTAAA AGAGCTTGTT
CAGTCCAAGG ATTTTTCACG TGGAAGATCC GATGTGCCGA TGCGCTTTGA AATAGAGATA
TTGCTGGGCG AGAATTTATA CAAATATGTG CTTGCTTTTG ATTTGCCGGA AAAATTCAAA
GAGCTTCGCG TTCTTGAAGA GCAACTTATC GTTTCTGAGC AGCCGGTTTA TCTCCGAAAA
GAGGCTTCCG TTACTCTTGC CAAAAGCCCG GGAAATCATC AGCCTCAGTT TTCAGTTGAC
TGGCATCTTG TTGCGCTTCC GGTAATTCAG GAAAAGTCAG AAACTGATCC CCTTCGTATT
TTCAGAACAT GGCTTGCCAA CATGATTATC TTAGCTCCAA TTCCGGGTTT TATGACGGGA
AAGTCCAGCG GTGAAACCTT TCAAGCCAAA CGTGATGGAT CAAACTTCGG AGAGTGGTTT
TCCGGCCTGC TCAGTCTTTA TCCAGCAGCT TATACGGAGC TTGATAAATA TCTCCGTGAA
GTGATCCCTG ATATCAAGGA TATTCAGAAC AAGGTGATTG GCGAAGATGC CAAAAGTATG
GTTGTTCAAT TTGAAGCAAA CCAGGCAACA CTTAAACTTG ACTTTAAAGA CTTATCAGAC
GGCGAAAAAT GCTTTTTTCT CTGTTCTGTT GTCCTTGCTG CTAATAAGTT TTATGGACCG
CTTTTCTGCT TCTGGGACGA ACCAGACAAC TATCTCTCCT TGTCAGAGGT TGGACATTTT
ATAACAGCAT TGCGCCGGTC ATTCAAATGC AGCGGCCAAA TTCTGGTAAC TTCACACAAT
GAAGAAGCTA TCCGCAAGTT TTCGAATGAC AACATTTTTG TGCTTGATCG GAAAAGCCAT
CTGGAACCAA CATTGATAAG ATTGCTCAGT GATATACCTT TCAACGGCAA TCTCGCTGAA
TCCCTTATTC GTGGAGATAT AGAGCTATGA
 
Protein sequence
MIQRLYVHNY RCLENFELNL KEFQSALLIG KNGSGKSTIS YVLELFQSIG RGVNRVKELV 
QSKDFSRGRS DVPMRFEIEI LLGENLYKYV LAFDLPEKFK ELRVLEEQLI VSEQPVYLRK
EASVTLAKSP GNHQPQFSVD WHLVALPVIQ EKSETDPLRI FRTWLANMII LAPIPGFMTG
KSSGETFQAK RDGSNFGEWF SGLLSLYPAA YTELDKYLRE VIPDIKDIQN KVIGEDAKSM
VVQFEANQAT LKLDFKDLSD GEKCFFLCSV VLAANKFYGP LFCFWDEPDN YLSLSEVGHF
ITALRRSFKC SGQILVTSHN EEAIRKFSND NIFVLDRKSH LEPTLIRLLS DIPFNGNLAE
SLIRGDIEL