Gene Ppha_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1878 
Symbol 
ID6463304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1966956 
End bp1967474 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content48% 
IMG OID642728089 
Producthistidine triad (HIT) protein 
Protein accessionYP_002018721 
Protein GI194336927 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA TGTATTCACC ATGGCGTGAA GTTTACATGC AGTCTTTCAA GGATGACAAG 
CCTGCTGCTG AAGATGGTAA ATCGGTTTTT GCCGATATTC CCCCGGAGGA AGATGAAAAG 
CGCTTTGTTC TTTACAGGGC AAAAAAATGC TTCATCATCA TGAACCTCTA CCCCTACAAC 
TGCGGGCATC TCATGGTGAT TCCCTATCAG CAGACCCCCG ACCTGTTAGA GCTTGACAAG 
GAGACAAAAC TTGAGCTCAT GGAGTTGACC GATCTCTCCA TCAGGGCTTT GAAACTTACC 
GTTCGGCCCC AAGGGTTCAA TGTCGGTGTT AATCTTGGAA GTATCGCCGG AGGAAGCATC 
GATAACCATA TCCATTTCCA CATTGTTCCA CGCTGGGAAG GTGACACCAA TTTCATGCCC 
GTCCTCGCCG ACGCAAAAGT TCTCAGCAAT GATATGCGCT CCACCTATAA GAGCCTGAAA 
AAAGCCTTCA CTGACCTTAC CCAGGCAGAA GAACAATAG
 
Protein sequence
MNRMYSPWRE VYMQSFKDDK PAAEDGKSVF ADIPPEEDEK RFVLYRAKKC FIIMNLYPYN 
CGHLMVIPYQ QTPDLLELDK ETKLELMELT DLSIRALKLT VRPQGFNVGV NLGSIAGGSI 
DNHIHFHIVP RWEGDTNFMP VLADAKVLSN DMRSTYKSLK KAFTDLTQAE EQ