| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1872 |
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| Symbol | |
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| ID | 6463324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1962865 |
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| End bp | 1963434 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728081 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_002018715 |
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| Protein GI | 194336921 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTTAC TTGATGCCGG GATAACACAG CACAATGTGC TGATAACATC GGTTGACAAT
GTTTTGAACT GGGCTCGGCT CTCTTCGCTC TGGCCTATGG GTTTTGGTCT CGCATGTTGT
GCTATCGAGA TGATGGCGAC CAATGCCTCC AATTACGATT TGGAGCGTTT TGGTATTTTC
CCTCGTTCCT CTCCCCGTCA GTCCGATCTG ATGATTGTTG CCGGTACCGT AACCATGAAG
ATGGCGGAAC GGGTTATTCG TCTCTACGAG CAGATGCCTG AACCTCGTTA TGTGTTATCG
ATGGGAAGCT GTTCCAACTG CGGCGGTCCG TACTGGGAGC ATGGCTATCA TGTGCTTAAG
GGGGTTGATC GTGTTATTCC TGTTGATGTT TTTGTACCAG GATGTCCTCC AAGACCTGAG
TCACTTATTG GTGGTTTGAT GAAGGTTCAG GAGCTTATCC GGATGGAGCA GATTGGTCTT
TCAAGGGCGG ACGCACTGAA GAAGCTGGCT GAAAAAAGTG TTGATCCCCA GTTTGTTATT
GAGCGGGAGC GTAAGGCTGC CGGAGCATAA
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| Protein sequence | MGLLDAGITQ HNVLITSVDN VLNWARLSSL WPMGFGLACC AIEMMATNAS NYDLERFGIF
PRSSPRQSDL MIVAGTVTMK MAERVIRLYE QMPEPRYVLS MGSCSNCGGP YWEHGYHVLK
GVDRVIPVDV FVPGCPPRPE SLIGGLMKVQ ELIRMEQIGL SRADALKKLA EKSVDPQFVI
ERERKAAGA
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