Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1865 |
Symbol | |
ID | 6463339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1956092 |
End bp | 1958368 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728074 |
Product | proton-translocating NADH-quinone oxidoreductase, chain L |
Protein accession | YP_002018708 |
Protein GI | 194336914 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.13806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACAGTT TAATTCAGTT ATCAATAGTC GTACTGCTGC TGCCGCTGCT CTCGTTTGTC ATTCTTATCT TTTTTAATCG TCGTCTTCCC AGAAACGGTG ATTTTCTTGG AGTTGGAATA CTTGGCACAG CATTTGGCAT CTCTGCCTAT ATCTTCTGGT CGGTCATTGT GCAGGCCTAC GATCCGGCAT TCAGGATTGC CTGGGATTTT ACCTGGATTG ATTTGGGCAA TGTACCGGGG GTAGGCCCGC TGCAGATCAA GATGGGCGTT GTTATCGACA ACCTCACGGC CATTATGCTC ACAATGGTAA CGCTTATCAG CCTGCTTGTT CACCTGTATT CAACCGGATA TATGGCCGGG GACAAGAATT ATGGAAGGTA TTTTGCCTAT CTGGGGATCT TTACCTTCTC CATGCTTGGC ATCGTACTCT CTGATAATCT GTTCGCTATC TATATTTTCT GGGAACTCGT CGGTCTCTCT TCCTATCTTC TTATCGGATT CTTCTTTGAA AAGGATAGTG CGGCTGATGC ACAGAAAAAG GCATTTCTTG CCAACCGTGT CGGCGACATC GGTATGTGGC TTGGTATTCT GATTCTCTAT TCCCAGTTCC ACACCTTCAG CTTCGAGCAG ATCTATGCCA ATCTTGCAGC AGGAAAGTTT GCTCTCTCCA ATGCTTGGTT AACGGCTGCG GGTATCCTTC TCTTTATGGG CTGCGTAGGC AAGTCGGCTC AGTTCCCGCT TCATGTATGG CTTCCTGATG CCATGGAGGG CCCGACACCG GTATCGGCCC TGATCCATGC GGCTACTATG GTTGCCGCAG GCGTTTACTT TGTTGCCCGC ATCTTTGTGA TGCTGACACC TGACGCACTG CATGTTATCG CCTTTATCGG TGCCATGACA GCCTTCATGG CAGCAACCAT AGCAATTACC CAGCATGACA TCAAAAGGGT TCTTGCCTAT TCGACGGTCT CGCAGCTTGG ATACATGGTT CTTGGTCTTG GTGTTGGCGC CTACTCGGCA TCACTCTTTC ACCTTGTTAC GCACGCATTT TTTAAAGCCT GTCTTTTTCT TGGTTCAGGC GCCATTATCC ATGCCATGCA CCATGAACAG GACATGCGCT GGATGGGCGG TCTTCGCAAA CAGATGCCAT GGACCTTTGC AACCTTTACC CTTGCAACGC TTGCCCTTGC CGGTTTGCCT CTTACCAGCG GTTTTCTGAG CAAAGATGCT ATTCTTGCAG GCGCTCTCGG TTTTGCTGAG GTAGAGGGTG GCGGTATTTA TTATCTCATT CCTGCTCTTG GATTCTTTTC TGCCATGCTT ACCGCTTTCT ATATGGGGCG TCAGATATGG CTTGTCTTCT TCGGTGAAAG TCGCACGCAC CTGAAACCAG CCGACAATCA TCATCAGGCT CATCATGCAC ATGCCAGTCA TGATGCGCAT ACCGACGATC ATCATGCTGC TCATGGAGTA CATGAGGTTT CATGGAACAT GCGGGCGCCA CTTGTTGTTC TGGCGACACT TTCCGTATTT TTTGTCTATT CCCCGGATCC CCTTGATGGC GCAAAAGGGT GGTTTATGAA GATGATTCCG ACCCCGGCAA CGGTTGTGGG TGCCGCCAAT CCACAGATAG GTGCCCATCC TGCAGGTACG GTTGCACCGC ATCTTGCGGG AGTTGTTCCG GCTGCTGAAG TCGCTCTTCC TGAACATGGA GCTGCTCATG GTGTTGCCGA ACATGGTGTT GCTTCAGTTG GACATGGCGG ACAAGTCTAC TCGGATCCGC GCCAGGCAGA AATCGTTCAT GCCGGACATG CTGCGCACTA CACCGCAATC TATATTTCCA CCCTGATGGT TGCGCTCGGT ATTGGCATGG CATTTGTTGT TTACGTCTTC AGGATTATTG ATCCTGATAA AACAGCCCAA TCCATCAGGC CACTTTACCT CTTTTCGCTT AACAAGTGGT ACTGGGATGA GATCTATGAT GCTACGGTTA TCAAGGGGTC AATGGTTATT GCTAAAATGC TCTCCTGGTT CGACACCAAT GTTGTTGATG GAATAGTCAA TGGCGTTGCT TTTCTGGTCA GAAAATTCGC TTTCCTTAAT GACGGATTTG ACAGAAACGT GGTTGATGGC CTCGTGAATT TTACAGCTTT CACCGTCAAT ACAACGGGCG CTGTATTGAG AAAGTTTCAG ACCGGCAAGG TGCAAACCTA TGTTGTGATG TTGCTTCTTG TGCTTGCTGG TTACTTTGTT TTTTATTTTA CACGACTGAT CTACTAA
|
Protein sequence | MHSLIQLSIV VLLLPLLSFV ILIFFNRRLP RNGDFLGVGI LGTAFGISAY IFWSVIVQAY DPAFRIAWDF TWIDLGNVPG VGPLQIKMGV VIDNLTAIML TMVTLISLLV HLYSTGYMAG DKNYGRYFAY LGIFTFSMLG IVLSDNLFAI YIFWELVGLS SYLLIGFFFE KDSAADAQKK AFLANRVGDI GMWLGILILY SQFHTFSFEQ IYANLAAGKF ALSNAWLTAA GILLFMGCVG KSAQFPLHVW LPDAMEGPTP VSALIHAATM VAAGVYFVAR IFVMLTPDAL HVIAFIGAMT AFMAATIAIT QHDIKRVLAY STVSQLGYMV LGLGVGAYSA SLFHLVTHAF FKACLFLGSG AIIHAMHHEQ DMRWMGGLRK QMPWTFATFT LATLALAGLP LTSGFLSKDA ILAGALGFAE VEGGGIYYLI PALGFFSAML TAFYMGRQIW LVFFGESRTH LKPADNHHQA HHAHASHDAH TDDHHAAHGV HEVSWNMRAP LVVLATLSVF FVYSPDPLDG AKGWFMKMIP TPATVVGAAN PQIGAHPAGT VAPHLAGVVP AAEVALPEHG AAHGVAEHGV ASVGHGGQVY SDPRQAEIVH AGHAAHYTAI YISTLMVALG IGMAFVVYVF RIIDPDKTAQ SIRPLYLFSL NKWYWDEIYD ATVIKGSMVI AKMLSWFDTN VVDGIVNGVA FLVRKFAFLN DGFDRNVVDG LVNFTAFTVN TTGAVLRKFQ TGKVQTYVVM LLLVLAGYFV FYFTRLIY
|
| |