| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1864 |
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| Symbol | |
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| ID | 6463344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1954416 |
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| End bp | 1956050 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728073 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_002018707 |
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| Protein GI | 194336913 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.142353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGTT TAATTGTTTT TCTGCCTATT ATTGCCGGTC TGGTAATACT TGCTGTGCCT
TCATCGCAAA AGCAGATAAT CAGAATTGTT TCATTGCTTG CGGCTCTTGC CCAGGGAGTG
CTGGCGGTTC TGATCTGGAG AGGTTATGAT CCTGCGCTAC CCGGAATAAC CGCTGGGCCA
GGGGGAAGTC CGCTGGGCTC ATTCCAGTTT GTTGAGAGGG TTCCGTGGAT CAGTCTCAAT
CTTGGTGGTT TTGGTTCACT GAACATTGAG TATTTCCTTG GTATTGATGG AATATCGGTC
ACCATGGTGA TTCTGACTGC CCTTGTCTCG GCAATTGGTA TTCTTTCAAG CTGGACCATA
CAGAAACAGG TGAAGGGCTA TTTTATCCTC TACAACCTGC TCGCCTCGGC TATGATGGGC
TGTTTTGTAG CGCTTGACTT CTTCCTCTTT TACGTTTTCT GGGAGGTTAT GCTTCTTCCG
ATGTACTTCC TTATTGGCAT CTGGGGTGGT CCTAACCGTG AATATGCAGC GATCAAGTTT
TTCCTCTATA CGCTTTTTGG TTCGGTGTTC ATGCTTCTTG TCATGATCGG ACTCTATTTC
AGTGTCATCG ATCCGCTGAC CGGAAACCAT ACCTTCAGCC TTGTTGCCAT GGCAAGCCAG
GAAAATTATA TCAAGGATGC CATTCTCGGC CCCGATAATG TTGTGTGGCG TTATGTCGCC
TTTATTGTTC TCTTTATCGG TTTTGCTATC AAGGTGCCTA TGTTTCCATT CCATACATGG
CTTCCTGATG CTCACGTTGA AGCGCCGACA CCTATTTCGG TTATCCTTGC CGGTGTGCTT
CTGAAGCTTG GTACCTATGG CATGATTCGT ATCAACTTTC CGCTGTTTCC CGAGGTCTTT
CAGGCCTCGA TGTATGTCAT AGGAATATTT GGTGCCATCA ACATTATCTA CGGCGCTTTC
TGTGCACTGG CACAGAAGGA TCTTAAAAAA ATGGTTGCCT ACTCTTCGAT CAGTCACATG
GGTTACGTGC TGCTCGGTCT TTCTGCCGGA AACAGCGAAG GTATGGTTGG TGCGCTTTAT
CAGATGTTTA ATCATGGCAC CATTACCGCC ATGCTCTTCC TTCTGGTCGG TGTTATCTAT
GACCGGGCGC ATACTCGCCA GATCGAAAAA TTCGGCGGAC TCGCTTCATA CATGCCGGTC
TATGCGGCCA TTGTTACGGT TGCCTGGTTT GCCTCTCTTG GTCTTCCTGG TCTGAGTGGT
TTTATCTCTG AAGCGTTGGT CTTTGTTGGC GCTTTCAGTT CTGAAACAAC AAGGCCTATC
GCCATTGTCT CGGTGCTCGG CATTGTTTTC GGTGCAGCTT ACCTGCTCTG GTCTCTGCAA
AGGATGTTCC TTGGCAAGAG AAGGGATGAT GCGGCTTATG ATCTTGAAGT TGGTGAAGAT
GGTCATGAGC ATATCCATTT TCATGACTGG AAGGGAAAGC TTGATCTTGA CGGACGTGAG
CTTGCCATGC TTGTCCCGCT CGTTGTGATT ACTATTTTCC TTGGTATCTA TCCGATGCCT
GTGCTCGGTA TGCTGACGAC GAGCATTAAC AAGTTGGTTC AAGTGCTTTC ACCCGTGGTG
ATGTCACAGA TGTGA
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| Protein sequence | MLSLIVFLPI IAGLVILAVP SSQKQIIRIV SLLAALAQGV LAVLIWRGYD PALPGITAGP
GGSPLGSFQF VERVPWISLN LGGFGSLNIE YFLGIDGISV TMVILTALVS AIGILSSWTI
QKQVKGYFIL YNLLASAMMG CFVALDFFLF YVFWEVMLLP MYFLIGIWGG PNREYAAIKF
FLYTLFGSVF MLLVMIGLYF SVIDPLTGNH TFSLVAMASQ ENYIKDAILG PDNVVWRYVA
FIVLFIGFAI KVPMFPFHTW LPDAHVEAPT PISVILAGVL LKLGTYGMIR INFPLFPEVF
QASMYVIGIF GAINIIYGAF CALAQKDLKK MVAYSSISHM GYVLLGLSAG NSEGMVGALY
QMFNHGTITA MLFLLVGVIY DRAHTRQIEK FGGLASYMPV YAAIVTVAWF ASLGLPGLSG
FISEALVFVG AFSSETTRPI AIVSVLGIVF GAAYLLWSLQ RMFLGKRRDD AAYDLEVGED
GHEHIHFHDW KGKLDLDGRE LAMLVPLVVI TIFLGIYPMP VLGMLTTSIN KLVQVLSPVV
MSQM
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