| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1862 |
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| Symbol | |
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| ID | 6463350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1951538 |
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| End bp | 1952626 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642728071 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_002018705 |
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| Protein GI | 194336911 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAGTA ATCAGACCTT TGCCGATGTA TTCAGAGCGA GGGGGGTAAG CCGCAGAGAC
TTTCTGAAGT TCTGCTCCCT TACATCAGTC TATCTTGGTC TTTCACCGTC TCTGCTGCCC
ACTATTGTCG AGGCAATGGA GAAGAAACCA AGGACTCCGG TAATCTGGCT TCACGGCCTT
GAATGCACCT GCTGTTCCGA GTCTTTTATC CGATCATCCC ACCCCTCTAT TGAAGACATA
CTCTTCAACA TGATCTCCCT TGATTATGAT GATGTTCTCA GCGCTGCTGC AGGTCATCAG
CTTGAGGATC AGCGCCGCAG GATCATGAAA GAGTACAAGG GAAAATACAT CCTCGCTGTT
GAAGGAAACG CCTCCACAAA AGATGATGGC GTTTATTGCA TGGTAGGCGG CGATTCTTTT
CTGAATACTC TGAAAGAGAC TGCCGCCGAT GCAGCAGCAA TCGTTGCGTG GGGTGCCTGT
GCTTCATTTG GTTGTGTGCA GAATGCTGAT CCCAACCCAA CAGGAGCCGC TCCGGTTTCC
GATATCATCA AAGACAAGCC CATTATCAAG GTACCAGGCT GTCCACCGAT ATCAGAGGTG
ATGACCGGTG TTATTACCCA TTTCCATACC TTTGGCACCT TACCTGAACT TGACCGTTTT
GGTCGTCCAA AAGCTTTTTA TAACACGAGG ATTCACGATA AATGCTATCG GCGTGCTTTT
TTTGATGCAG GCATGTTTGT TTCAAGCTTT GATGATGAAG CGACAAGAAA AGGGTGGTGC
CTCTACAAGA TGGGTTGCAA AGGTCCAACC ACCTATAATT CCTGTTCCAA GATACAGTGG
AACGGGGGCA CAAGCTTTCC GATCGGTTCC GGTCACCCTT GTATTGGCTG CTCTGAGCCG
AATTTCTGGG ACAGAGGTCC ATTCTACCAG AGACTTGCCG ATGTCCCGTT CCTTGGCACT
GACAGCAATG CCGACAAAAT TGGTATTATT GCCGTTGGTG CCGCCGCTGC GGGCGCTGCC
GCACATGCTG CAGTGACCGC TGTAAAGAAG GCAAAATCAG AGAAGCATGA TCATCAAGAT
AAAGCTTAA
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| Protein sequence | MQSNQTFADV FRARGVSRRD FLKFCSLTSV YLGLSPSLLP TIVEAMEKKP RTPVIWLHGL
ECTCCSESFI RSSHPSIEDI LFNMISLDYD DVLSAAAGHQ LEDQRRRIMK EYKGKYILAV
EGNASTKDDG VYCMVGGDSF LNTLKETAAD AAAIVAWGAC ASFGCVQNAD PNPTGAAPVS
DIIKDKPIIK VPGCPPISEV MTGVITHFHT FGTLPELDRF GRPKAFYNTR IHDKCYRRAF
FDAGMFVSSF DDEATRKGWC LYKMGCKGPT TYNSCSKIQW NGGTSFPIGS GHPCIGCSEP
NFWDRGPFYQ RLADVPFLGT DSNADKIGII AVGAAAAGAA AHAAVTAVKK AKSEKHDHQD
KA
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