| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1861 |
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| Symbol | |
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| ID | 6463351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1949804 |
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| End bp | 1951522 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728070 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002018704 |
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| Protein GI | 194336910 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAA AAATAGTAGT TGATCCGATT CCTCGTATTG AGGGACATTT GAGAATAGAG
GCGACGCTGA ACGACAGCAA TATGATTGAG GAGGCCTACT CCAGCGGCAC GATGTGGCGG
GGGATTGAGG TGATTCTTAA AGGACGCGAC CCGAGGGATG CATGGGCTTT TGCCGAACGT
ATCTGCGGTG TCTGTACGAC CGTACACGCC CTTGCATCGG TTCGTTGCGT TGAGGATGCA
CTTGGTATCG CGGTTCCGAC CAATGCCCGT ATCATCAGGA ATCTGATGAA TGCAACACAG
GTGACCCAGG ATCACCTGGT GCACTTTTAC CACCTTCACG CTCTTGACTG GGTCGATGTT
GTCAGCGCTC TCAAGGCCGA TCCGAAACAG GCCTCCGTTA TAGCACAGAG CATCTCTCCA
TGGCCGAAAT CATCACCAGG CTACTTCAAG GAGTTGCAGC AGCGCCTTGT CGGCTTTGTT
GAAAGTGGTC AGCTTGGCAT TTTCTCAAAC GGTTACTGGG GCCATCCGGC CTACAAGCTT
CCACCGGAAG TGAACCTTAT TGCTGTGGCG CACTATCTTG AGGCGCTTGA TTTCCAGAAA
GAGATTGTCA AGATCCATAC CATTTTTGGA GGCAAGAATC CTCATCCAAA CTATCTGGTG
GGTGGTATGG CCTGTGCCAT TGATCCCAAC AGTGATACGG CTATCAATAT CGAGCGGTTG
TCGATGATCA AGAAAATCAT TGACGAAACC CAGACTTTTA TCGACCAGGT CTATATTCCC
GATTTGCTTG CCATTGCAGG ATACTACAAG GATTCATTGT ATGGCGGAGG CCTTGGCAAC
TATCTCAGTT ATGGCGATTT TCCCGAGACA ACGCTTGAAG ATTTCAAGAC GCTGCTCTGG
CCGAGGGGAG CGATTCTCAA CAAGGATCTC ACGACCGTTA TTGATGTCGA TCCAAGGGAT
GCGTCACAGG TAACCGAAGA GGTGAGCCAC AGTTGGTATA CCTACACAAA GGGAGATGCA
AAGGGTCTGC ATCCCTGGCA GGGAGAGACC ACCCCGAAAT ATACCGGCCC AAAACCACCT
TTCGAGCATC TCGATACCGA CAAAAAGTAC AGTTGGCTCA AGACCCCGCG CTGGAAAAAT
CATCCGATGG AGGTGGGCCC TCTTGCTCGC GTGCTGATTG CCTATGCCAA GGGCGACCCC
ATGATCAAGG AGACGGTCGG GCTGGTGCTT TCAACACTTG GTGTTGGCCC TGAAGCGCTC
TTTTCGACGC TGGGCCGAAC TGCGGCCAGA GGCATTGAAT GCAAGCAGAC GGCAGGCTTC
ATGCGCCATT ACTACGATCA ACTGGTTGCC AATATCAAAA CCGGTGATCT CCGTACCTTT
AACAGTGAGC GGTGGGACCC CTCAACCTGG CCTGAAGAGT GCAAGGGATT CGGTTACACT
GAAGCGCCCC GTGGTTCGCT TGGTCACTGG ATTCACATCA AAGATCAGAA GATCAAGGAG
TACCAGATTG TTGTTCCCTC CACCTGGAAT GCCTCTCCGC GTGATGCCAA TGGTAATTCA
GGAGCTTATG AGTCAGCATT GAAAGGTACG CCGATGGTCA ATCCGGAACA ACCGCTTGAG
ATTCTCAGAA CGGTGCACTC ATTCGATCCG TGTCTTGCCT GTGCCTCGCA TCTCTTTGAC
ATGAACGGCA AGGAGATTAC ATCGGTTACA ATCGTCTAA
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| Protein sequence | MAKKIVVDPI PRIEGHLRIE ATLNDSNMIE EAYSSGTMWR GIEVILKGRD PRDAWAFAER
ICGVCTTVHA LASVRCVEDA LGIAVPTNAR IIRNLMNATQ VTQDHLVHFY HLHALDWVDV
VSALKADPKQ ASVIAQSISP WPKSSPGYFK ELQQRLVGFV ESGQLGIFSN GYWGHPAYKL
PPEVNLIAVA HYLEALDFQK EIVKIHTIFG GKNPHPNYLV GGMACAIDPN SDTAINIERL
SMIKKIIDET QTFIDQVYIP DLLAIAGYYK DSLYGGGLGN YLSYGDFPET TLEDFKTLLW
PRGAILNKDL TTVIDVDPRD ASQVTEEVSH SWYTYTKGDA KGLHPWQGET TPKYTGPKPP
FEHLDTDKKY SWLKTPRWKN HPMEVGPLAR VLIAYAKGDP MIKETVGLVL STLGVGPEAL
FSTLGRTAAR GIECKQTAGF MRHYYDQLVA NIKTGDLRTF NSERWDPSTW PEECKGFGYT
EAPRGSLGHW IHIKDQKIKE YQIVVPSTWN ASPRDANGNS GAYESALKGT PMVNPEQPLE
ILRTVHSFDP CLACASHLFD MNGKEITSVT IV
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