Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1860 |
Symbol | |
ID | 6463353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1949107 |
End bp | 1949790 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728069 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_002018703 |
Protein GI | 194336909 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAGAA TAATAGAAGA AATCTACGTC TGGAGGCTGC CTGTCAGGTT TTATCACTGG ATCAATGCCC TGTGTATGGT GGTTCTTTTT GTAACGGGAA TGTATATCGC CGCCCCTTTG CTGAGCCCTC CGCTCGGTGA AGCGGTCTGG TATAAGGGCA TGGGCTGGTG GCGTTATATG CATTTCGTTT TTGCCTTTAT TTTTATCGCC AACTTTCTTT TCCGCCTCTA TTGGGCGCTC TTTGGTGGTG ATAAATATGC CCGCTTTGGC GGTTTCAGGC CATGGTCGCC CTCCTGGTGG GGCAAGCCCT TCAGGGAGCA GGTTGAGTCC TATCTCTTTC TGCGCACGGA TGAGCCGAAC TACGTAGGTC ATAACCCCGT TGCAGCTCTG GCTCACTTTG TCTTCATTTT CTGCGGCTCG ACCTTCATGA TTCTTTCGGG CTTGGCAATG TATGGTGAAA ACAATCCGGG AGGGTTCAAC GAAACCTTGT TTGGCTGGAT GATTCCCCTT TTCGGCGGTA GCTACACCCT TCATTTCATA CACCATCTTG GGGCATGGAT GTTGCCGATT TATGTCATCA TGCACCTTTA TGCGGTTATC CGTCACGATG TGGTCGATCG TACCAGCGTT ACCTCTTCAA TCATTACCGG TTTCAAGCAC AAGGTTGAAG AAGAACCTGT TTGA
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Protein sequence | MGRIIEEIYV WRLPVRFYHW INALCMVVLF VTGMYIAAPL LSPPLGEAVW YKGMGWWRYM HFVFAFIFIA NFLFRLYWAL FGGDKYARFG GFRPWSPSWW GKPFREQVES YLFLRTDEPN YVGHNPVAAL AHFVFIFCGS TFMILSGLAM YGENNPGGFN ETLFGWMIPL FGGSYTLHFI HHLGAWMLPI YVIMHLYAVI RHDVVDRTSV TSSIITGFKH KVEEEPV
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