| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1859 |
|---|
| Symbol | |
|---|
| ID | 6463355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1948522 |
|---|
| End bp | 1949106 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728068 |
|---|
| Product | hydrogenase maturation protease |
|---|
| Protein accession | YP_002018702 |
|---|
| Protein GI | 194336908 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGTA TTGCGTTATC TGTTTTTGTT CTGTCTAAAG CCCATTGCAG AGGTTTAACC
TTCCCGCAGT GGGCTTTTTG TTATCATGCT CAACCAATCA ATTTTGCTGT GAAGTACAAT
CGTATCAATA TTATCGGCCT TGGCAACGTG CTCCATGGCG ATGAGGGTTT CGGAGTTGCA
GCTCTCAACC GTTTTCGTGA ATCATCGGAT TTTCCTGAAC GGGTGAACTG TATCGATGGC
GGAACCCAGG GAATCTACCT GCTCGACTAC ATCGAGTCGT GCGATGCCGT CATTGTTTTT
GACGCACTCA TTCCCCTCGA CTATGAGCGC CGGGTCTATG TCTATCGCAA TGATGAACTA
CCCGCTTTTA TTCATCGCAA AATGTCCTCG CATCAGATGG GATTCAGCGA ATTGCTCGGA
CTGGCCCGGC TGCGCGGCAA AATGCCCCAT GAGCTTGTGC TGATTGGCGT TCCTCCCAAA
GAGCTTGAAC TCTCCATGGA ATTAAGTCCT GAAGTTGCTC TCCTGCTGCC TGAAGCGGTA
GAGGCGGGGC GGGAAATTGT AGAAGGATGG TTGGCGGAGG AGTAG
|
|---|
| Protein sequence | MESIALSVFV LSKAHCRGLT FPQWAFCYHA QPINFAVKYN RINIIGLGNV LHGDEGFGVA
ALNRFRESSD FPERVNCIDG GTQGIYLLDY IESCDAVIVF DALIPLDYER RVYVYRNDEL
PAFIHRKMSS HQMGFSELLG LARLRGKMPH ELVLIGVPPK ELELSMELSP EVALLLPEAV
EAGREIVEGW LAEE
|
|---|
| |