Gene Ppha_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1842 
Symbol 
ID6463389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1940782 
End bp1941312 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content52% 
IMG OID642728054 
Producthypothetical protein 
Protein accessionYP_002018688 
Protein GI194336894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTTC CTGCCTGGCA CGAAGAGCCG ATCACCAAAA GCCATGACCG CCGGTTTGCT 
TTTGATTGCG GGGATGAAGC CTTGAATGAG TTTTTGTGGC GTCATGCCAG AAAAACTCAT
ATCAGTGGCG GGGCCAAAAC TTTTCTGGCA GTGGAAAATA GTGACGTCAG GAAGATTCTC
GGCTTTTACA GTATAGCCCC GGCGTCTGTT ACCTATGAGA AAACTCCGGA AGTGATCAAA
CGAGGATTAG CCCGCCATGA GGTGCCGGTC TTCAGGCTTG GTCGTTTAGC AGTTGACCGA
TCTGTTCCGG GCCGCAGTAT GGGTGGGCAG TTATTGCTTG CTGTCGCTCG TCGTTGCTTG
CTTGTTGCTG CACAGGTTGG CGGTGTTGCT CTTCTCATCG ATGCGAAGAA TGATCTGGTT
GCACAGTGGT ATGCCAGCTA TGGGGCAGTG CCGTTGCTTG ATGCACCGCT TTCACTTCTT
TTGCCGTTCA AAACTATCCA TGCGGCCCTT GTTTCAGCAG GGAAACTTTG A
 
Protein sequence
MTLPAWHEEP ITKSHDRRFA FDCGDEALNE FLWRHARKTH ISGGAKTFLA VENSDVRKIL 
GFYSIAPASV TYEKTPEVIK RGLARHEVPV FRLGRLAVDR SVPGRSMGGQ LLLAVARRCL
LVAAQVGGVA LLIDAKNDLV AQWYASYGAV PLLDAPLSLL LPFKTIHAAL VSAGKL