| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1830 |
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| Symbol | |
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| ID | 6463418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1932945 |
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| End bp | 1934090 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728044 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002018678 |
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| Protein GI | 194336884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000559355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA AGTTTTTATC GATTATCGCA GCCGCCCTGT TGGCTTTCCC GTTACAGGTA
TCGGCAGCTC CAGTCAAGAT AGGATTTATC AACTCAATCA CCGGTAAAGA GGCGCAAATT
GGCGAGAATC TGACCAATGG CGCGGCTATG GCAATTGAAG ATCTGAAGGC CAAGGGAATT
CAGGTTGAGC TTGTCAGGGA AGATGATGGC GGTGACCCGA AAAATGCTCT TGCGGCGTAT
GAAAAGCTGG TGACTCGTGA TGCCGTTATC GGTGTTGTTG GCCCTTATAC CTCGGGGTGT
GCAAATGTTG TTGCCTCAAG GGCTGATCAG TATAAGGTGC CGCTGCTTGT TCCTGCAGCC
GCCAAGGAGG AGATCACCAT GAAGGGGTAT AAGAATGTTT TCCGCCTGAA TGCTCCTGCC
AATGTCTATT CAAGTGTGCT GATGAAAGCG GTGGCGCCTT ACAAACCGAA GACGATCGCC
TATGTCTATG CCGCAACTGA TTTTGGCGTA TCGACGGTCA AGACTGCCCA GGAGAATGCT
CTGAAAATGG GGTTGAAGGA GGTTGCCAAC GAAAAGTATC AGCAGGGGCA ACCCGATTAC
CGCTCTTCAC TCGCAAAAGT CAAGGCGGCT AATCCTGATC TTGTTTTTCT GGTGTCGTAT
GATGCTGATG CTATTCTGCT GATGCGCCAG GCCAGGGAGA TCGGACTTAC ACCAAAGGCT
TTTCTTGGCG CGGGTGCCGG TTATACAACG GCTCAGTTTG CCCAGCAGAC TGAAATCTCC
AATCTTGTTA TTTCTGCTAC CCAGTGGACT GATGATGTCA ATTGGCCGGG TGCGGCCGAT
TTTGCAGTTC GTTACAAGGC AAAATATGCG AAGGAGCCCT CCTATCATGC GGCCTGTGCT
TATGAAGCCA TGAGGATTAT GGCGATTACG GCATCCGCCA CCAAAAGTGC CGTGAAACTT
CAGGCGGCTC TTAAGGGAGG ATATTGGAAT GGTATTATGG GGCCAGTCAA ATTTGCTGAC
TATGGCGGTT TTACCAATCA GAACAACCAT CCGATGCTGG TGCAGCAGAT TGCAAACGGT
AAGTATGAAA CGGTCTATCC TGCTCAGTTC AGCAAAAAGA AGCTAATCTA TCCCTTCAAG
CGTTAA
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| Protein sequence | MKQKFLSIIA AALLAFPLQV SAAPVKIGFI NSITGKEAQI GENLTNGAAM AIEDLKAKGI
QVELVREDDG GDPKNALAAY EKLVTRDAVI GVVGPYTSGC ANVVASRADQ YKVPLLVPAA
AKEEITMKGY KNVFRLNAPA NVYSSVLMKA VAPYKPKTIA YVYAATDFGV STVKTAQENA
LKMGLKEVAN EKYQQGQPDY RSSLAKVKAA NPDLVFLVSY DADAILLMRQ AREIGLTPKA
FLGAGAGYTT AQFAQQTEIS NLVISATQWT DDVNWPGAAD FAVRYKAKYA KEPSYHAACA
YEAMRIMAIT ASATKSAVKL QAALKGGYWN GIMGPVKFAD YGGFTNQNNH PMLVQQIANG
KYETVYPAQF SKKKLIYPFK R
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