| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1812 |
|---|
| Symbol | |
|---|
| ID | 6463446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1917596 |
|---|
| End bp | 1918108 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642728026 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018660 |
|---|
| Protein GI | 194336866 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA CAAAAGATGG TAATGGAGAT GCTGAGTTTG ATTTTATGGG CTTGGGCGGT
CTTTTTAAAG GAATAGAAAA ATTAGTTGAT CTGGCAGCAA AACTTGAAAC ATCAGGATCA
ATTAATCGGG AAGGAGAATT TAATTTAGAT TCGTTAAAAA AAGGGATGAA TGGTGTTTAT
GGATTTACAA TAAAATCCGC AATTGGTGGT GCTCCAAAGG TTGAAACTTT TGGTAACATA
ATAAAAACAC CACAAGGCCC AAAGGTTAAC GAAGAGCGTG AACCTATAAC AGATGTATTC
GATGAAAATG ATGAAGTTGT AATAATTGCA GAAATGCCGG GTATTGAAGA GTCTGATATT
ATTATTGACT TTAAGGATGA TATACTTGAA ATTTCAACGA AAAGCAGAAA AAAAAGCTAT
CGGAAAGAAT TATTATTACC GATAACTTCT GATAATCAAG TTATTAAAAA TAAATACACA
AATGGAATAC TTGAAATAAG AATTAAAAAA TAA
|
|---|
| Protein sequence | MKNTKDGNGD AEFDFMGLGG LFKGIEKLVD LAAKLETSGS INREGEFNLD SLKKGMNGVY
GFTIKSAIGG APKVETFGNI IKTPQGPKVN EEREPITDVF DENDEVVIIA EMPGIEESDI
IIDFKDDILE ISTKSRKKSY RKELLLPITS DNQVIKNKYT NGILEIRIKK
|
|---|
| |