Gene Ppha_1789 details

Gene Information

• Locus tag: Ppha_1789
• ID: 6462219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 1889835
• End bp: 1890263
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 642728001
• Product: response regulator receiver protein
• Protein accession: YP_002018638
• Protein GI: 194336844
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.34666
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATC TTTCTGACAT CGTGGTGCTT TTTGTTGATG ATGAAGCTGA TATTCTCAGT 
TCTTTAAACC GTTTTCTTCG TAAAGAGCCT TACCAGAAAT TCTTCGCAGA AACCACAGTA 
AAAGCTCTTG AGTTGCTTGA ATGCCATGAT GTTGCTATTG TTATTTCAGA TTTCAATATG 
CCGGACATGA ACGGCCTGGA ACTCATAAAC CTGGTCAAAC AGCGTCATCC TGAAATTGTT 
CCCCTTATTA TTTCCGGTCA TGAAAGTGTT GGGAAGATTA TAGAATCCTC TCATCCCCGC 
ACTATTTTTC GTTTCATCAC AAAACCGGTT GAACCGATAA CGTTAAGAAA GGTTATCAAT 
GACGCTATTC ACTTCTACCG TTATGAGGCC GGAGAGAATA CAGAGTCCCT GCTGACAAAA 
ACTGTGTGA 

 

Protein sequence

MKNLSDIVVL FVDDEADILS SLNRFLRKEP YQKFFAETTV KALELLECHD VAIVISDFNM 
PDMNGLELIN LVKQRHPEIV PLIISGHESV GKIIESSHPR TIFRFITKPV EPITLRKVIN 
DAIHFYRYEA GENTESLLTK TV