| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1782 |
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| Symbol | |
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| ID | 6461948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1881611 |
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| End bp | 1883107 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727994 |
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| Product | protease Do |
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| Protein accession | YP_002018631 |
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| Protein GI | 194336837 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC TGCTTCTTGT TTTTGCGGGT ATTGCCGTAG GCGCACTTGT CTTTTCGAAT
GTTGAGTTTA GCCTCTCTTC CAGGGGGTTG AGCTTTTCAA ACAGTCCAAG TTTTGCTACG
GCAAAAAACA ATATTGAGAA TTATCCCATC CAGTCACTCA AAGGCTTTAA CGAGGCATTT
GTGCAGATTG CCGAGTCGGC AACCCCTTCA GTAGTGACGA TTTTCACTGA AAAAACGGTA
AACCAGCGGA TTGGCTCCCC GTTTGGTTTT TGGGGAAGGC CTTTCTTTGA TGATTTTTTT
GATATGCCGG AGATTGCCCC TCGCAACGGC CAGAAAAAAG TATTGCAGGG CATCGGATCG
GGAGTCGTCG TAACGGCTGA CGGTTATATT CTGACCAACA ATCATGTGAT CGATAATGCC
GATGCCGTCT ATATCCGCAC CTTCGATAAC AAGAAGATTG ATGCCAAAGT AATAGGAAAA
GATTCCAAAA CCGATCTTGC TGTTATCAAG GTCAATGCAA AAAATCTGAA ACCAATCCTG
ATTGGCGACA GTGACAAACT CAGGGTTGGC GAATGGGTCA TTGCCATAGG AAGTCCACTT
GGTGAAAATT TTGCACGAAC GGTTACTCAG GGTATCGTCA GTGCCAAAGG ACGGGCCAAT
GTCGGGCTGG CCGATTATGA AGACTTCATA CAGACTGATG CGGCCATCAA TCCGGGAAAT
TCCGGAGGCC CTCTTGTCAA CATCAACGGC GAGCTTGTCG GCATCAATAC GGCTATAGCA
AGTCGAACCG GTGGATTTGA TGGTATAGGA TTTGCCGTTC CGTCAAACAT GGCCCAAAAA
GTAATGACCG CACTCATTAC TACCGGAAAA GTTACCCGAG GTTATCTTGG CGTCAGTATC
CAGGATATTG ATGAAAATAT TGCAAAAGCA ATGCACCTTA AGGCTGGAGA AGGGGCGCTT
GTAGGAACGG TTGTCGAGGG TGGACCTGCG GCAAAGATTG GTATCAAAAC CGGCGATGTT
ATCCTTGATA TCAACGATCA AAAGGTTACA GGCAGTATTG AACTGCGTAA TGCCATCTCC
AGTCAGTTAC CCGGATCGAT GGTCAAGTTT CGGGTGCTCA GGAACGGAAC GATCATGCTT
TTTCAGGCCC GTCTTGAAGA ACAGCCCGCC AGGGGTGTGG CTTCAGCCAT GACAGAAGAA
CAGGAAAAAA TTCCTGCGGT ACTCGGTTTT AAGGCCGAGG AGCTTACAGC AAGGCTGGCA
CAGAAATTGA ACCTGGTGCC CGGCTCTGGC AAGGTTGTAC TTACAGCTCT TGATCCTGCA
TCCAATGCCT ACCTTGCCGG ATTGCGCGTC GGCGATATTA TACTTACCCT CAACCGTCAG
AGTGTGAACT CGTTTGCCGG GTATAGTGCT CTTATCAAAA ACATCAAAAG CGGAGATCTT
CTTTTTCTGC TGGTAGAAAG GAAGGGCAAT AAAATATATT TTGCGTTTAA TGTGTAA
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| Protein sequence | MKYLLLVFAG IAVGALVFSN VEFSLSSRGL SFSNSPSFAT AKNNIENYPI QSLKGFNEAF
VQIAESATPS VVTIFTEKTV NQRIGSPFGF WGRPFFDDFF DMPEIAPRNG QKKVLQGIGS
GVVVTADGYI LTNNHVIDNA DAVYIRTFDN KKIDAKVIGK DSKTDLAVIK VNAKNLKPIL
IGDSDKLRVG EWVIAIGSPL GENFARTVTQ GIVSAKGRAN VGLADYEDFI QTDAAINPGN
SGGPLVNING ELVGINTAIA SRTGGFDGIG FAVPSNMAQK VMTALITTGK VTRGYLGVSI
QDIDENIAKA MHLKAGEGAL VGTVVEGGPA AKIGIKTGDV ILDINDQKVT GSIELRNAIS
SQLPGSMVKF RVLRNGTIML FQARLEEQPA RGVASAMTEE QEKIPAVLGF KAEELTARLA
QKLNLVPGSG KVVLTALDPA SNAYLAGLRV GDIILTLNRQ SVNSFAGYSA LIKNIKSGDL
LFLLVERKGN KIYFAFNV
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