| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1774 |
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| Symbol | |
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| ID | 6462863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1873248 |
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| End bp | 1873997 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727986 |
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| Product | LmbE family protein |
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| Protein accession | YP_002018623 |
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| Protein GI | 194336829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGCAAT CATCCGAAAA AGTTTATGCA CTGGCTTTCG GCGCCCATCC TGATGACGTC
GAACTTGCAT GTGGAGCTAC GTTGCTCAAA ATCATAAGCG AAGGGCAGAA TGTCGCCGTC
TGCGACCTCA CAAGAGGAGA GATGGGAACG CTTGGAACTC CTGAAACACG CAGAAGCGAA
GCCGCAACAG CCACCGCGAT CATGGGATAC CACAGCCGCA CCACCCTTGA CCTTGGAGAC
TCGAAACTCT TCCACACTGA AGAGAACATA GCGGAAATCA TCAAGCTTAT CAGGCTGTTC
CGGCCAGATG TCGTTTTTGC CAATTCCCCT GAGGAACGCC ACCCGGATCA CATCAAAGCA
TCAAAACTTG TGACTGAGGC TTGCTACTAT GCCGGTCTTC AGCAGCTCGC CACGACCATG
AACGGAGAGG CACAACAGCC TTACCGCCCC GCACACCTCC TCTACTACAT CCAGTTCAAA
CACCTTGAAC CAGACATTAT CGTCGATATT TCGGATACTT TTGAATCCTC AAGAAGAGGG
GTACTCGCCT TCGCCTCGCA ATTCTACAAG GAGGGCACAA CCGATGAGGC AAAAACCATG
ATCAAACGCC GGGAGTTTCT TACCGGTCTG GAAGCACGCG CCCGCTATTT CGGAGAACAG
ATCGGGACCC TTTACGGCGA AGGGTTCAAA CTCTCCACCA CCCTCGCCAT CAACTCATTT
ATAAGCGCCT TCCCCCGTAA CATAAAGTGA
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| Protein sequence | MKQSSEKVYA LAFGAHPDDV ELACGATLLK IISEGQNVAV CDLTRGEMGT LGTPETRRSE
AATATAIMGY HSRTTLDLGD SKLFHTEENI AEIIKLIRLF RPDVVFANSP EERHPDHIKA
SKLVTEACYY AGLQQLATTM NGEAQQPYRP AHLLYYIQFK HLEPDIIVDI SDTFESSRRG
VLAFASQFYK EGTTDEAKTM IKRREFLTGL EARARYFGEQ IGTLYGEGFK LSTTLAINSF
ISAFPRNIK
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