Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1768 |
Symbol | |
ID | 6462881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1868163 |
End bp | 1868687 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642727980 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_002018617 |
Protein GI | 194336823 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.897944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGTC ATCTTGATCT CATCGACCTG AAATTAATTG AGTCTCTTGG GGAAAACGGC AGGGTTCGAT TGAGTGAACT TGCTGAAATC GTCGGCCTTT CAATACCCTC GGTCAGTGAA AGGCTTGACA AGTTGCAGAA GGGTGGTATC ATCAAGGGTT TTACCATGGA GGTTGATGAA CGGCAGCTCG GCTTTGATAT TCATGCTTTT GTACGGGTCA GAATCGATTC ATCCAAGCAC TATAAATCAT TTATGGAGCA TGTGATGAAA GAGGATGAGA TTATGGAGTG TTTCTCGGTT ACCGGTGAGG GGTCGCATAT TTTAAAGGTG ATGACCCATA ATACGGCATC GCTTGAGCAG TTTCTTTCAA GAATACAGAG CTGGCCTGGT GTTCTTGGTA CCAATACGAG TTTTGTGCTG AGTCAGTTGA AGAAAAACAA AAAAATCAGC GCAGAAATCG TTCGAAACAA TCTTCAGGAC CGGCAGGTGC TGATTACGTT TGATGAAAAG AGGTCAAGGA AGTAA
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Protein sequence | MSGHLDLIDL KLIESLGENG RVRLSELAEI VGLSIPSVSE RLDKLQKGGI IKGFTMEVDE RQLGFDIHAF VRVRIDSSKH YKSFMEHVMK EDEIMECFSV TGEGSHILKV MTHNTASLEQ FLSRIQSWPG VLGTNTSFVL SQLKKNKKIS AEIVRNNLQD RQVLITFDEK RSRK
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