| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1761 |
|---|
| Symbol | |
|---|
| ID | 6462892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1860409 |
|---|
| End bp | 1861776 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642727973 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_002018610 |
|---|
| Protein GI | 194336816 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
|---|
| TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC GACCTGCGGC ATTTCTTCTT GGCGCCCCCT CGAGTGGCTC AGGAAAAACA
ACCCTCACCC TTGCCATTCT CAGAATTCTG GCCCGGCGCG GAGGTCGGGT TCAGCCCTTC
AAATGCGGGC CGGATTATCT CGATACCCGA TTGCACTCCA TGGCAGCCTC ATATGGCAGC
GTGGTGTCCG AGGGCATCAA TCTCGATACC TTCATGGCTT CGGAAGCGCA TGTACAGGAG
TTGTTCAATC GCTATTCAAG CGGTGCGGAT GCTTCGGTTG TTGAAGGGGT GATGGGGCTT
TTTGACGGGG CAGAAAAAGC GCAGGGAAGC AGTGCGGAGA TTGCAAAACT GCTTGCACTT
CCGGTCATCA TGGTGGTCAA TGCACAAAGT ATGGCATATT CGGCAGCACC GCTGCTCTAC
GGTTACCGAA CCTTCGATCC CGATGTGAAG GTTATCGGAG TGATCTTTAA CCAGGTCAAT
ACGCTGTCGC ACTACCGCTT TCTTGAAGCT GCAGCAGATG ACGCAGGGGT TGAACCGCTC
GGCTATGTGC CCCGTCATGA GCCAATTGCC ATCAGTGAGC GCCATCTCGG ACTCAATACC
TCTTCAGGTT ATGATCGCGA AGGAGCGATT GAGGCCATGG CCGATCATAT TGAAAAAAGT
GTGGCTATCG ATCGCCTTCT TGAACTGGCA AGCAGAGCGC AGCCAAACGT TTCCGGGAGC
ACTTCCTCTC GCAGTTGTTC AGCAGGCCGG GAAGAAAGGG TCATTGCCGT TGCCAGGGAT
GAGGCCTTCA ATTTTACCTA TCGGGAGAAT CTTGACGTGC TTGGTGAGTA TGGCCGGATC
GACTATTTCA GCCCGATGGA TGATGAGCGG ATTCCGTCTT GTGACCTGCT CTATCTGGCT
GGGGGTTATC CTGAACTCTA TGCCGAACAA CTCTCCTCGA ACAACGCCAT GCGTGCGGCC
ATTGCGGACT ATTGCCGGAA AGGAGGCGCT GCCTATGCAG AGTGTGGCGG GATGATGTAC
CTTGGTGCGG CAATGACCCT TGGCGATGGG TCGCGCCATC CCATGTGCGG TGTACTCGAT
CTCGATACCA CCATGCAGGA GAGCCGTCTC ACGCTTGGTT ACCGGAAAGT CCGCCTCAAC
AACGGTTATG CCGGAGAGCT TCGCGGTCAT GAATTTCACT ACTCCCGAAT CGGAAGAGCA
GGGGAGCTGC CGAATATCGC ATCCATAACC AATGCCCGAA ACGAAGAGAC AGGAACTGCA
CTTTTCCGCC AATACAACAC CGTCGCATCT TATCTGCATC TCTATTGGGG AGAAACAAGG
GATTTCCCGC AATTTCTTCT GAACATGGAG CCTACGTTAC AGCCATGA
|
|---|
| Protein sequence | MTKRPAAFLL GAPSSGSGKT TLTLAILRIL ARRGGRVQPF KCGPDYLDTR LHSMAASYGS
VVSEGINLDT FMASEAHVQE LFNRYSSGAD ASVVEGVMGL FDGAEKAQGS SAEIAKLLAL
PVIMVVNAQS MAYSAAPLLY GYRTFDPDVK VIGVIFNQVN TLSHYRFLEA AADDAGVEPL
GYVPRHEPIA ISERHLGLNT SSGYDREGAI EAMADHIEKS VAIDRLLELA SRAQPNVSGS
TSSRSCSAGR EERVIAVARD EAFNFTYREN LDVLGEYGRI DYFSPMDDER IPSCDLLYLA
GGYPELYAEQ LSSNNAMRAA IADYCRKGGA AYAECGGMMY LGAAMTLGDG SRHPMCGVLD
LDTTMQESRL TLGYRKVRLN NGYAGELRGH EFHYSRIGRA GELPNIASIT NARNEETGTA
LFRQYNTVAS YLHLYWGETR DFPQFLLNME PTLQP
|
|---|
| |