| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1733 |
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| Symbol | lysS |
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| ID | 6462950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1839735 |
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| End bp | 1841270 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642727948 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002018585 |
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| Protein GI | 194336791 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACAG AGAAGGATCC GAACAAGAAT ACCCCGGAAC AGCAAACCCC GATTTCGCTG
AACGACCAGA TGCAGCGCCG TCTTGAAGAG CGCCAGCAGC TTATGGAGGC AGGAGTCAAC
CCCTATCCCA CCCATTTTGA GGTCACCCAC TCCTCCGGTG AGATTATTGC AAATTTCGTA
GAGGAGGCCA AAACGCCGGT CTCTGTGGCC GGACGCATCA TGACCATCCG CAAGATGGGC
AAAGCCTCCT TTTTCCACCT TCAGGACTCC GCAGGCCGCA TCCAGATCTA CATGAAAAAG
GATGAAGTTG GCGACGCCAC CTACGACACC TTCAAACTGC TCGACATCGG CGATATCATC
GGCATCAAGG GCTTTACCTT CAAAACCAGA ACCGGCGAAA TCTCCGTCCA TGCCGAATCG
CTGGAACTGC TCACCAAATC GCTGCGCCCT ATACCCGTCG CCAAAGAGAA AGAGGTTGAT
GGCGAAAAGG TTGTTTTTGA CGCCTTCAGC GACAAGGAGC TTCGTTACCG CCAGCGCTAT
GTTGACCTCA TCGTCAATCC GGAGGTCAAA GAGACGTTTA TCAAACGGAG CGCCATCGTC
TCCTTCATGC GCAACGCTTT TACCGGCAAG GGATGGCTCG AGGTTGAAAC GCCGATTCTG
CAACCCATCT ACGGCGGCGC AGCGGCTCGT CCCTTTACGA CGCACCATAA TGCGCTCGAC
ATGCAGCTCT ACCTGCGCAT TGCCAACGAA CTCTACCTCA AGCGGCTCAT CGTCGGCGGC
TTTGACGGCG TCTTTGAGTT TGCCAAGGAT TTCCGCAACG AAGGGATCGA CCGCTTCCAC
AACCCTGAGT TCACCCAGGT TGAACTCTAC GTTGCCTACA AGGATTACAA CTGGATGATG
GAAATGGTCG AAGAGCTCTT CAGCCAGACC GCTTTGGCCG TCAACAAGAG CGAAGTGACC
ACCTTTCTCG GCAACGAAAT CAGCCTCAAG CCCCCTTTCC GCCGCCTGAG TATCATCGAC
GCCATTACCG AATACACCGG CCAGAATATT GCAGGACAAT CCGAAGAGCA ACTGCGCTAC
ACCGCAAAGG ATCTCGGCCT TGAACTCGAC CCCAAAATCA GCAGCGGCAA GATCATCGAT
GAAATTTTCG GCGAATTTGT GGAGCCCAAG CTCATTCAGC CAACCTTCAT CATCGACTAC
CCCACCGAGA TGTCGCCCCT TGCCAAGGAG CACCCCTCAC AACCCGGCAT TGTTGAGCGC
TTTGAGCTGA TCATCGGCGG TAAAGAGGTC TGCAACTCCT TCTCCGAACT CAACGACCCC
GTCATCCAGC GCGAAAGGCT CGAATCGCAG GCAAAACTGC GCCAGCGCGG CGACGAAGAG
GCCATGATTG TTGACGAGGA TTTCCTCCGC GCCATCGAAT ACGGCATGCC TCCATGCGCT
GGCATCGGCA TTGGCATTGA CCGCCTCGTC ATGATTCTGA CCGGGCAGGA CTCCATCAGG
GAGGTTATTT TCTTCCCGCA TTTGAAACCG GAGTAG
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| Protein sequence | MHTEKDPNKN TPEQQTPISL NDQMQRRLEE RQQLMEAGVN PYPTHFEVTH SSGEIIANFV
EEAKTPVSVA GRIMTIRKMG KASFFHLQDS AGRIQIYMKK DEVGDATYDT FKLLDIGDII
GIKGFTFKTR TGEISVHAES LELLTKSLRP IPVAKEKEVD GEKVVFDAFS DKELRYRQRY
VDLIVNPEVK ETFIKRSAIV SFMRNAFTGK GWLEVETPIL QPIYGGAAAR PFTTHHNALD
MQLYLRIANE LYLKRLIVGG FDGVFEFAKD FRNEGIDRFH NPEFTQVELY VAYKDYNWMM
EMVEELFSQT ALAVNKSEVT TFLGNEISLK PPFRRLSIID AITEYTGQNI AGQSEEQLRY
TAKDLGLELD PKISSGKIID EIFGEFVEPK LIQPTFIIDY PTEMSPLAKE HPSQPGIVER
FELIIGGKEV CNSFSELNDP VIQRERLESQ AKLRQRGDEE AMIVDEDFLR AIEYGMPPCA
GIGIGIDRLV MILTGQDSIR EVIFFPHLKP E
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