| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1684 |
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| Symbol | |
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| ID | 6463086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1791913 |
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| End bp | 1792575 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642727900 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002018537 |
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| Protein GI | 194336743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000256212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCA AAGCAGTTAT TTTCGACCTT GACGGCACCT TGCTCAACAC CCTGCAGGAT
ATTGTCAACA CCCTCAATAC GGTGCTTGCC CAGCACGATT ACCCCATACA TACCCTGGAT
GAGTGCCGCT TTCTTGTTGG GCACGGTATG AGAGAGCTGG TCAAAAAAGC GCTCCCCGAA
GAGGCCGGAA CCGAGGAGAT AATTGATCTG ATGCTCAAGG ATCTGATGAT GCACTATGCC
GACAACTGGA ACCGTTACTC ACGCCCCTAT CCCGGTATCA GCACCCTGCT CGACAAGCTT
ACCGAACGGG GAATAAAAAA GGCCATCCTT TCAAACAAAG CCAATCACTT CACCCGTCTT
TGCGCAGAGG AGCTGCTGAA AGAGTGGAAT TTCGATGTTG TGATGGGCCA TCACAGCGGC
ATAGCACACA AACCTGACCC CGAAGGGGCC CTGCTTGTTG CCCGGATGCT CAACGAAGAG
CCCGGCTCAA TTCTCTATGT CGGTGACAGC GGCATTGACA TGCTCACCGC TACAAGGGCC
GGTATGTACC CCCTCGGCGT CCTCTGGGGA TTCAGACCGG AAAGCGAGCT TTTGGAGTTT
GGGGCAAAAA CAGTGGTGCA GCACCCCGAG GAGATTATCA CATTGCTTGA AGAAATCCTG
TAA
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| Protein sequence | MTFKAVIFDL DGTLLNTLQD IVNTLNTVLA QHDYPIHTLD ECRFLVGHGM RELVKKALPE
EAGTEEIIDL MLKDLMMHYA DNWNRYSRPY PGISTLLDKL TERGIKKAIL SNKANHFTRL
CAEELLKEWN FDVVMGHHSG IAHKPDPEGA LLVARMLNEE PGSILYVGDS GIDMLTATRA
GMYPLGVLWG FRPESELLEF GAKTVVQHPE EIITLLEEIL
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