Gene Ppha_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1678 
Symbol 
ID6463099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1786170 
End bp1786829 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID642727894 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_002018531 
Protein GI194336737 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00615654 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC GTCCGGTCCA TGAGCTTATC AAAGAACTCT CCCAGGTTCT TGTTCAACTC 
TCCGATAAAG TAGTGGGGAA TTTGCTTGAT GCCCTGCATG CTGTAAAATA TCAGGACGAA
CAGGGTGCGC GCAAGATCAG GATGGTAGAT GATGAAATTG ATTTGGCCGA GGTCAACCTT
GAGGAGCGCT GTCTTGCATT TCTTGCCTTG CAGCAGCCGG TAGCAAGAGA CCTTCGCACC
ATTGTTACCA TTATTAAAAT CAACGATGAT CTTGAGCGTA TCGGTGACCT CGCAGTTCAT
ATTATTGAAC GGATGCCGGA AATCAGTCCG GAGATGCTCG AATTATTTAA ATTTGAGCAG
ATGGGTATGC GCGCCGGCGA GATGGTTAAA AATTCAATTG AAGCTTTTGT CTCCAAAGAC
CGTATACTTG CAGGCCATGT GTGCGCTCTT GATGAAGAGG TCGATGTGAT GCATCGCTCC
GTCTTTAAAA AAGTGATTGC CTTGATGAAA GGGCCAGACT CTGATGTTGA CCAGCTCATA
GCGGCGTTAA GCATATCAAG GTATATCGAA CGCATGGCAG ACCATGCAAG TCGCATAGCC
AATGAGGTGA TATTTTTGGT GACGGGTGAA ATTGTTCGCC ACAGGGGAGG ATTTTATTAA
 
Protein sequence
MSERPVHELI KELSQVLVQL SDKVVGNLLD ALHAVKYQDE QGARKIRMVD DEIDLAEVNL 
EERCLAFLAL QQPVARDLRT IVTIIKINDD LERIGDLAVH IIERMPEISP EMLELFKFEQ
MGMRAGEMVK NSIEAFVSKD RILAGHVCAL DEEVDVMHRS VFKKVIALMK GPDSDVDQLI
AALSISRYIE RMADHASRIA NEVIFLVTGE IVRHRGGFY