Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1677 |
Symbol | |
ID | 6463101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1785284 |
End bp | 1786015 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642727893 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_002018530 |
Protein GI | 194336736 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0167747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAACC TGTTAGGCAA ATTTTTCGGC GATTCACCGA AAACAGCAGA AACCCCGAAA GCTTTTACCA TCCAGATTGA TCCTCTGAAG TTTGCTCTTT CCATGAAACC GCAGGGGACG GTTCATGTGC AGCTTGAATC ACTCAAGCAG AAGCTGACCA AACTCTCTTC AAATGTCGAA AACAACCTGA TGCTCAGTAT ACGGGCATCA ACAAAAGCAA ATATCGAGCT TGCTGCTTCA GCATTCAAGT TTGATGAAGC CTATATCCGG AAAGGGAAGT TCGAGGTTGA ATACCTGACG CTGGCTTATG CTTCATTCCA GAATCTTGGT GCAGAAGATC TCAAGGCGGT CAACTATGCC CGGATGATCC TTCGGGAGCT TGAAAAACTG GCCCAGCTCG CACTCAATAT TGCCGACAAA ACCGGTTATG TGGAGTTTGC CAATGTTCAG GAGCTGCACA AGGATGAGTA TGGACTCAAA CCGATGGGTG ATATTACGGC TGAAATGATC AAGAAAGCAG TTGAGGCCTA TGTCAGCAGC AACTCAAAAC ATGCCAGCGA AACCCTGATG ATGATGCAGG AGATTCAGAC TCTTTACGAT GCGGCTGTCG CAAAAATCAA AGCATCGGTT AACGACCAGA ATATTACGAA TCTGACCGGT ATCCTTTCCA TTGTTGAACA TGTCAAGACA TCTGCGGATA TCTCCTGTTC CATTGCGAGC CATTTCTGCT GA
|
Protein sequence | MANLLGKFFG DSPKTAETPK AFTIQIDPLK FALSMKPQGT VHVQLESLKQ KLTKLSSNVE NNLMLSIRAS TKANIELAAS AFKFDEAYIR KGKFEVEYLT LAYASFQNLG AEDLKAVNYA RMILRELEKL AQLALNIADK TGYVEFANVQ ELHKDEYGLK PMGDITAEMI KKAVEAYVSS NSKHASETLM MMQEIQTLYD AAVAKIKASV NDQNITNLTG ILSIVEHVKT SADISCSIAS HFC
|
| |