| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1675 |
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| Symbol | |
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| ID | 6463105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1780985 |
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| End bp | 1784089 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727891 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002018528 |
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| Protein GI | 194336734 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.640028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGA CAGAGCTCTC CATAAAACGA CCGACGCTCA TTGTCGTTAT CTTCACCGTG
CTTGGTATTC TCGGCCTCTT CAGCTACAGG CAACTGCAGT ACGAACTGCT GCCAAAAATG
ACGCCACCTG TTGTTACCAT ATCCATCCGT TATCCAGGGG CTTCGCCGGG TGAAGTTGAG
ACCTCATTGA CCAAACCGGT TGAGGAGGCT GTCTCCGCTA TCGAAAAAAT CTCCTCCATA
ACCTCGACCT CAACCGAAGG TCTGTCGGTC GTTGCCATCG AGTTTTCCAA CTCTGCCAAT
ATTGAAAAGG CATTGCAGGA CGCACAGCGC AAGATCAACG AGGTGCGCGA CAGTTTTCCC
GATGAGGCAA AGGCTCCGGT CATTACCCGT TTTGCGCTTG ATGAGGTTCC GGTACTGCGT
ATCGGAGCAA CCTCATCGTT ACCGGATACC GATTTTTATC AACTCCTCAA GGATGATATC
AAGCCCCAGC TTGCAAGCAT AGCGGGAGTA GGCCAGGTTT ATCTGCTCGG AGGACGTGAG
CGTGAAATCA AGGTCAATAT CGATCTTGAA CGGCTTCAAA GTTACAGTCT CACCATTCCC
GATGTGCTTA AAGAGGTCGG AAAGGCCAAT ATTGATTTCC CAACCGGTAA AATTGATGAT
AGCGACAAGC AATTTGTGGT GAGGCTTGCC GGTAAATTCA CGAGCCTTGA AGAGCTGGGA
GCATTGGTGC TCCGCTCCTC CTCTACCGGA ACCGTGACAC TTCGTGATGT TGCCGAAGTC
GAGGATGGCT TCAAGGAGAT TACAACCCTT ACCAGGGTGA ACGGACGCAG TGCTGTCGGC
ATTATGGTCA TGAAACAGAG CGATGCCAAC ACGGTTGATG TCAGCCGCCT GACAAGGGCA
ACGCTCTCCC GCCTTACAGC GCTCTACCAC AGCAAGAACC TTTCGTTCGA TATTGCACAG
GATGCCTCTA CCTTTACGCT TGAGGCCGTT ACTGCCGTAC AGCATGACCT GATGCTCGCC
ATTCTTCTTG TTGCACTGGT CATGATGCTC TTTCTGCACA GTCTGCGCAA CTCCCTGATT
GTCCTTGTCT CCATTCCGAC ATCGCTGGTG ACCACCTTTA TCGGGATGTA TGCTTTCGGA
TTTTCCCTCA ATCTCATGAC CCTCCTCTCC CTTTCGCTGG TAGTGGGAGT TCTGGTGGAC
GACTCCATTG TCGTACTTGA AAATATTTAT CGCCATCTTG AACGCGGTGA AGAGCCACGC
CATGCAGCCC TTACCGGCAG AAACGAGATT GGCTTTACCG CACTCTCCAT CACCCTTGTC
GATGTGGTCG TTTTTCTTCC GCTTTCACTG GTAAGCGGTA TTGTCGGCAA TATCCTGCGC
GAGTTTTCCG TAGTCATGGT CATATCAACC CTCGTCAGTC TTTTTGTCTC CTTCACCCTG
ACGCCACTGC TTGCATCACG CTTCTCCAAA GTTGAAAAGT TTTCAGGCAA GAACATCTTC
GAACGTTTCG CCATCGCTTT TGAAAACAGC TTCCAGCGAT TGAGGGAGGG CTATCTCAAT
CTTCTGCAAT GGAGTCTCCG CAATCCACGG AAAGTTTTTT TCAGCGCAAT CATTCTGCTT
TTTTCCTCTT TTCTTCTTCC CTTTTTCGGC TTTATCGGAG GAGAGTTTAT CTCCGTCTCC
GACCGTGGAG AATTTGCTGT CATGCTGGAA CTTGAACCAG GGACACCCCT TGAAGAGACC
AATCGGGTGA CAAGAAGTGT GGAACGTCGT CTTACCGCAA TGGCCGAAGT TAAAAAAGTG
ATGGTCAATG TTGGTGCGTC GAACGAAGGG TTTTTCAACC AGAGTGCAGA CAATATTTCA
GAAATCAACG TCAGGCTCTC CCCCAAGGAG GAACGAAGCC GATCGACCGA TGCCATCATG
CAGGCAATCC GCATCAACCT GCAGGATATT GCGGGGCTCA AGGCAAGCAT CAACCCGATT
GGTATCTTCG GAACCGCCAA TGAGACACCA GTTGCTGTTA TTCTCAGCGG GCCCCTCAGA
AGTCAGGTAA CACGGGTGGC TGAAGCGTTG CGAGACAGCG TCAAAACGAT TGCAGGCACA
GCCGACGTCA AGCTTACCTC ACAGGTAGGG AGTCCGGAGA TGCGCATCGT CGTTGACCGC
GAAAAAATGG CATCATTCGG CCTCACCATT GCCGATGTTG GAGCAGCCCT CCGCACAGCC
TATGCCGGAG ATGAAGCTGG TAAATTCCGG GATGGAGGTG ACGAATATGA TATCAGGGTT
ATGCTCGACA AATACTACCG TCAAGGTACC GCCACCCTTT CCGAAATTAC CTTCCGTACG
CCCGAGGGCG ATCTGGTTCG TCTTGGACAG TTTGTCTCCT TTGAGCAGGA TCGGGGTTAT
ACCCAGTTGC AGCGTAAGGA TCGCAACAAT GCCGTTTGGG TAAAGGCACA GGTTATCGGG
CGTCCTGTTG GCAGCATCGG CAAGGAGATT GAGCGCATTA TGGGGAATAT GAAAAAAAGT
GGTTTCATGC CCTCAACGGT TTCCTACGCC TATGAATCTG ATTTGAAACG GCAGGGAGAG
TCGAATTCAA CTCTTCTGCT CTCCTTTCTT GTTGCAATTA TCTTTGTTTA TCTTATCATG
GTAGCGCTCT ATGATTCCTG GATCTGGCCG ATGGTGGTCA TGTTTTCCAT TCCGCTGGCC
CTTATCGGAG CCCTTTTTGC CCTTGCCCTT ACCGGCAAAT CGCTCAGTAT CTTCACGATT
CTCGGTATTA TTATGCTGGT AGGACTTGTA GGAAAAAATG CAATACTTCT GGTCGATTTT
ATCAATAAAT TCCGTCTTGA GGGTATGGAG CTTTCTGTGG CGATTATTGA AGCTGCCAGG
GAGCGGTTAC GCCCGATTCT CATGACCACC CTGACCCTGA TTTTTGGACT TCTGCCGATT
GCACTTTCGG GAAGTTCCGG CTCTGAATGG AAATCCGGTC TTGCTGTTGC TCTTGTCGGC
GGTTTGGCCA GCTCGATGTT TCTTACCCTG TTGGTGATTC CTGTAGTCTA TGTCTGGTTT
GACCGAATGA GCCGGAAGTT AGCCAGACTG AAACGCAAGC CGTGA
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| Protein sequence | MTLTELSIKR PTLIVVIFTV LGILGLFSYR QLQYELLPKM TPPVVTISIR YPGASPGEVE
TSLTKPVEEA VSAIEKISSI TSTSTEGLSV VAIEFSNSAN IEKALQDAQR KINEVRDSFP
DEAKAPVITR FALDEVPVLR IGATSSLPDT DFYQLLKDDI KPQLASIAGV GQVYLLGGRE
REIKVNIDLE RLQSYSLTIP DVLKEVGKAN IDFPTGKIDD SDKQFVVRLA GKFTSLEELG
ALVLRSSSTG TVTLRDVAEV EDGFKEITTL TRVNGRSAVG IMVMKQSDAN TVDVSRLTRA
TLSRLTALYH SKNLSFDIAQ DASTFTLEAV TAVQHDLMLA ILLVALVMML FLHSLRNSLI
VLVSIPTSLV TTFIGMYAFG FSLNLMTLLS LSLVVGVLVD DSIVVLENIY RHLERGEEPR
HAALTGRNEI GFTALSITLV DVVVFLPLSL VSGIVGNILR EFSVVMVIST LVSLFVSFTL
TPLLASRFSK VEKFSGKNIF ERFAIAFENS FQRLREGYLN LLQWSLRNPR KVFFSAIILL
FSSFLLPFFG FIGGEFISVS DRGEFAVMLE LEPGTPLEET NRVTRSVERR LTAMAEVKKV
MVNVGASNEG FFNQSADNIS EINVRLSPKE ERSRSTDAIM QAIRINLQDI AGLKASINPI
GIFGTANETP VAVILSGPLR SQVTRVAEAL RDSVKTIAGT ADVKLTSQVG SPEMRIVVDR
EKMASFGLTI ADVGAALRTA YAGDEAGKFR DGGDEYDIRV MLDKYYRQGT ATLSEITFRT
PEGDLVRLGQ FVSFEQDRGY TQLQRKDRNN AVWVKAQVIG RPVGSIGKEI ERIMGNMKKS
GFMPSTVSYA YESDLKRQGE SNSTLLLSFL VAIIFVYLIM VALYDSWIWP MVVMFSIPLA
LIGALFALAL TGKSLSIFTI LGIIMLVGLV GKNAILLVDF INKFRLEGME LSVAIIEAAR
ERLRPILMTT LTLIFGLLPI ALSGSSGSEW KSGLAVALVG GLASSMFLTL LVIPVVYVWF
DRMSRKLARL KRKP
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