| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1671 |
|---|
| Symbol | |
|---|
| ID | 6463109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1777944 |
|---|
| End bp | 1778309 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642727887 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018524 |
|---|
| Protein GI | 194336730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.245039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA CAGCAAAGCT GGCGGCAATT CTTCCTGAAC AGAGCGGTAC AGGAAAAAAT
GGAACCTGGA AAAAACAGGA TATTATTGTC GAAACTGACG GGCAGTATCC GAAGAAAATC
TGCATCTCCC TTTGGGGGGA GAAGTACGAC AGAAACCTCC TCAAGGTGGG ATCCAGGCTC
ACGATTTCCT TCGATATCGA GAGTCGTGAG TTCAACGGGA AGTGGTATAC CGATGTCAAA
GGATGGAAGG TTGAGGGTGT CAATGACGGG GGAGCCTCCT ATGCTCAGGA TGCGCCCTCT
TATGCACCCC CGGCTTACGA GCGGGAAGGA GAGAGCGTTA TCTCCAATGA CGATTGTCCC
TTTTGA
|
|---|
| Protein sequence | MQLTAKLAAI LPEQSGTGKN GTWKKQDIIV ETDGQYPKKI CISLWGEKYD RNLLKVGSRL
TISFDIESRE FNGKWYTDVK GWKVEGVNDG GASYAQDAPS YAPPAYEREG ESVISNDDCP
F
|
|---|
| |