| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1669 |
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| Symbol | |
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| ID | 6463115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1776572 |
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| End bp | 1777330 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642727885 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002018522 |
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| Protein GI | 194336728 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.497149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTT TTGAGAAAAT TGCGCTCGTC ACGGGAGCCG CAGGAGGAAT TGGCAGGGCA
GTGGCACTCT GTTTTGCAGG GGAAGGCGCA GTTGTGATTG TCAGCGACAT CAATGCGACC
GGATGCGCAG AAACCCTTGA ACAGCTTGAA CGCAAAGGTG GAAGCGGCAT GTCGGTGATA
GCGGATGTAA CGCAGGAGGA AGAAATTCTG GCGCTCTACC GCCAGACAGG AGAACGCTAC
GGGAGGCTTG ATATTGTGGT GAACATTGCC GGTGGAGACT GCGAACCGGC AGCCGATGTA
GAAGGGATTG ACTACCTCAG AATGAGCGCC AATCTCGACC TGAACCTTAA ATCATGCATC
ATCTCCTGCC GTGAAGCTGC CCGGTTGATG AAGCCCCAAG GTTTCGGCAA AATCGTCAAC
ATGAGCTCAC TGGTCTACCG GGGGAGTCCG AACCAGTTCT CCTATGCAGC AGCCAAAGGT
GGTATTTACG CCTTTACCCG TTCGCTTGCC CTGTCGCTTG GGCGCTACGG TATAACGGCC
AATGCCCTTG CGCCAGCCCT TGTTGAGGTG CCAGCCTTTG TTGCGGCATT GGGCCCCGAA
CGGTGGGAGA TGCTTCGCCG GGAGTGCGCA CAACGCTACC CGCTGGGCAG GGTCGCAACG
CCAGACGACG TCGCTCGCTG CGCCCTCTTT CTTGCTTCCG CTGATGCCGA CTTCATTACC
GGCCAGATTC TTGAAATTTC CGGAGGCGCA AGGCTTTAA
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| Protein sequence | MRLFEKIALV TGAAGGIGRA VALCFAGEGA VVIVSDINAT GCAETLEQLE RKGGSGMSVI
ADVTQEEEIL ALYRQTGERY GRLDIVVNIA GGDCEPAADV EGIDYLRMSA NLDLNLKSCI
ISCREAARLM KPQGFGKIVN MSSLVYRGSP NQFSYAAAKG GIYAFTRSLA LSLGRYGITA
NALAPALVEV PAFVAALGPE RWEMLRRECA QRYPLGRVAT PDDVARCALF LASADADFIT
GQILEISGGA RL
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