| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1662 |
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| Symbol | |
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| ID | 6463252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1760549 |
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| End bp | 1761580 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727879 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002018516 |
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| Protein GI | 194336722 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.250727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAAAT ATCTCAATAC CCTTTTTGTC ACTACACAGG GCGCCTACCT CTCAAAGGAG
GGTGAGTGTG CTGTTATCAA AATAGAAAAA GAGGTCAAAA CGCGCATCCC GCTGCATATG
CTTGACGGCA TCATCTGTTT TGGTTCGGTA ACCTGCAGCC CATTTTTGCT TGGCCATTGT
GCTGAAAGCG GTGTAACAGT AACATTTTTA AGCTTGTATG GAAAATTTCT CTGTCAGGTT
CAGGGAGCGA CACGAGGGAA TATTTTACTG CGGAGAGCAC AGTACCGTAT GGCTGACAAT
AACCTTCAAA CCGCTCGCCT CGCCCGCTCT TTTGTTATCG GCAAAATCGG TAATGCCCGA
ATCACACTTG CACGGACGGT AAGGGATCAT CCCGAAAAAG TGAACTCTGT TAAACTGAAA
AATGCCCAGC ATATCCTTGC TGGTTGCATA AAGCGCTTGC AGGATGAAAC CGATCAGGAA
CGTATCAGGG GAATTGAGGG CGAAGCAGCA AAAGTTTACT TCGACGTCTT CGATGAGTGT
ATCACCTCTA CAGATCCATT GTTCCGCTTT ACCGGTCGCA ACCGCCGTCC GCCACTTGAC
CGAATAAACT GTCTGCTCTC TTTTCTCTAT ACCCTGCTGA CACACGATAT TCGCTCTGCG
CTTGAGTCGT GCGGTCTTGA TCCTGCTGCA GGTTTTTTAC ACAAAGACCG ACCGGGACGC
CCAAGTCTTG CTCTTGACAT GATTGAAGAG TTCCGTTCGT ATATTGCGGA CAGGTTGGCA
CTATCGCTGA TCAATCGAGG TCAGATTCAA TCCAAAGATT TTACCATCTC GGAAACGGGT
GCTGTACTCC TGAAAGATGA TGCTCGCAAA ACGCTTTTAA CCGCCTATCA AAATCGGAAG
CAGGAAGAAA TCGAGCACCC GTTTGTCAAA GAAAAAATGG CCATCGGTTT ATTGTGGCAC
ATGCAAGCTA TGCTGCTTGC CCGCCATATC CGGGGCGATA TCGACACCTA CCCGCCATTT
GTCTGGAGAT AA
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| Protein sequence | MKKYLNTLFV TTQGAYLSKE GECAVIKIEK EVKTRIPLHM LDGIICFGSV TCSPFLLGHC
AESGVTVTFL SLYGKFLCQV QGATRGNILL RRAQYRMADN NLQTARLARS FVIGKIGNAR
ITLARTVRDH PEKVNSVKLK NAQHILAGCI KRLQDETDQE RIRGIEGEAA KVYFDVFDEC
ITSTDPLFRF TGRNRRPPLD RINCLLSFLY TLLTHDIRSA LESCGLDPAA GFLHKDRPGR
PSLALDMIEE FRSYIADRLA LSLINRGQIQ SKDFTISETG AVLLKDDARK TLLTAYQNRK
QEEIEHPFVK EKMAIGLLWH MQAMLLARHI RGDIDTYPPF VWR
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