Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1661 |
Symbol | |
ID | 6463137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1759908 |
End bp | 1760552 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727878 |
Product | CRISPR-associated protein Cas4 |
Protein accession | YP_002018515 |
Protein GI | 194336721 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.975016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCCTG AATCCGATTT CGTGATGCTG TCAGCATTAC AGCATTTTGT CTACTGCCCC CGGCAGTGTG CGCTGATCCA TCTGGAACAG ATATGGAGCG AGAACGGCTA CACTGCTGAG GGACGGGAGA TGCATGAACG GGTCGATAAC GGTGAAACAT CATACCGGAG CGGTGTCCGT GTAACGAGAA GTGCAGCATT GCGAAGCGCA ATACTTGGCA TTTCGGGTAT AGCTGACGTG GTGGAATGGC ATAAGTTGAA AGATCATGAG GAGCCGTTTC CGGTTGAGTA CAAACGCGGC AAACCGAAAA AACATGATGC AGATAAAATC CAGCTTTGTG CCCAGGCCAT GTGCCTTGAG GAGATGCTTG GAATTCAAAT TTCAGCAGGC GCACTGTTCT ACGGCCAGAC AAAGCACCGA CTGGATGTTG ATTTCGATGA TGTTTTGCGT GAAAAAACGG TTCTTGCTGC AGAAGGGGTG CATGACCTCT TTCGGAATGG AGTAACACCG CCACCTGAAC CCGGACCGAA ATGCAAGCTC TGCTCGTTGA AAGAAGAGTG CCTGCCGGAG GTGATTGTTC AGGGAAAAAC GGCGAAAGTA TACCTTCAAA AATTGTTTCA TACACTCTCG GAGGAGGAGA TTTGA
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Protein sequence | MYPESDFVML SALQHFVYCP RQCALIHLEQ IWSENGYTAE GREMHERVDN GETSYRSGVR VTRSAALRSA ILGISGIADV VEWHKLKDHE EPFPVEYKRG KPKKHDADKI QLCAQAMCLE EMLGIQISAG ALFYGQTKHR LDVDFDDVLR EKTVLAAEGV HDLFRNGVTP PPEPGPKCKL CSLKEECLPE VIVQGKTAKV YLQKLFHTLS EEEI
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