Gene Ppha_1658 details

Gene Information

• Locus tag: Ppha_1658
• ID: 6463142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 1756542
• End bp: 1757177
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 642727875
• Product: CRISPR-associated protein Cas5 family
• Protein accession: YP_002018512
• Protein GI: 194336718
• TIGRFAM ID: [TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype; [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTATG GAATAAAGTT ACGAGTCTGG GGCGACTACG CATTATTTAC TCGACCAGAA 
ATGAAGGTTG AAAGAGTGTC GTATGATGTG ATGACACCTT CGGCAGCACG AGGCATATTA 
GAAGCAATTT ACTGGAAACC ATCTATTCGA TGGATAATAG ATAGGATTCA TGTTTTAAAG 
CCTATCCGTT TTGAAAATAT TCGCCGTAAT GAAGTTGCAA AAAAGACAAG TCTAAATAGA 
GTTGATATGG TAGGACAGTA TCCAATTAGT ATTATTGTGG ATGACTCAGA TACTCGTCAA 
CAAAGAGCGT CAATGGTGCT TCGAGATGTT GAATATATTA TTGAAGCTCA TTTTTATTTT 
TCTATGAAAG AAGATAATAA TGAAGGAAAG CATTTAGATA TTTTTACAAG ACGAGCAAAA 
GCAGGTCAAT GTTTTCATCG TCCATATTTC GGGTGTCGTG AGTTTCCTGT TAATTTCGAG 
TGGTGTGTTG ATATTCCGAA ATCATTGCTT TCTGGTGAAC AGGATTTAGG ATATATGCTA 
CATGATATTG ATTTTGAAAA TAACATGACT GCTCGTTTTT TTCGAGCCAT CATGCACAAT 
GGCATTATTA ATTGTAAACA GGAGGCCGTC TCATGA 

 

Protein sequence

MSYGIKLRVW GDYALFTRPE MKVERVSYDV MTPSAARGIL EAIYWKPSIR WIIDRIHVLK 
PIRFENIRRN EVAKKTSLNR VDMVGQYPIS IIVDDSDTRQ QRASMVLRDV EYIIEAHFYF 
SMKEDNNEGK HLDIFTRRAK AGQCFHRPYF GCREFPVNFE WCVDIPKSLL SGEQDLGYML 
HDIDFENNMT ARFFRAIMHN GIINCKQEAV S