| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1638 |
|---|
| Symbol | |
|---|
| ID | 6463195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1726267 |
|---|
| End bp | 1726956 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642727854 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002018492 |
|---|
| Protein GI | 194336698 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTT TACAAAAACT TATCAAACCT GTAGCCTTTC TGCTCATTCT TGCAATGACC
ACCGTTACCT GGGGTTGTCA GACAACAACC AATGCCGGAC AGGGTGCTGG CATAGGCGCA
GCAGCAGGCG GCGTTATCGG AGGAATTATT GGCAGCAGAT CGGGCAGTTG GGCAAAAGGG
GCAATTATCG GAGCCGTCCT CGGCGGAGCT GGTGGAGCGC TTATTGGCAA CTACATGGAC
AAACAGGCGG CAGAAATCGA CCACGATGTG GAGGGAGCAC GTGTTGAGCG CGTCGGCGAA
GGCATCAGAG TGATTTTCGA CTCCGGCATT CTCTTTTCGA CTGGTTCAGC AACAATCACC
TCAACCAGCC GCTACAACAT TGAAAAACTC GCCCGGATTC TTAACCGCTA TAACGAAACC
AGTCTGGTCA TTGAAGGCCA CACCGACAGT ATCGGCAGTG ACGATGCAAA TCAGTCTCTT
TCCGAAAGAA GGGCCGACTC GGTAGCAAAC CTCCTTGAAG CATACCGTGT TTCAGGCAGA
AGGCTCTCGC CGATCGGGTA CGGTGAAACC CGTCCTGTTT CATCAAACGA AACAGAGTAT
GGTCGCAAAC TTAACCGCCG CGTTGAAGTG CTCATCTATG CAAACGACGA CCTCAAACGC
CAGGCAGATT CCGGAGAATT ACGGTATTAA
|
|---|
| Protein sequence | MTFLQKLIKP VAFLLILAMT TVTWGCQTTT NAGQGAGIGA AAGGVIGGII GSRSGSWAKG
AIIGAVLGGA GGALIGNYMD KQAAEIDHDV EGARVERVGE GIRVIFDSGI LFSTGSATIT
STSRYNIEKL ARILNRYNET SLVIEGHTDS IGSDDANQSL SERRADSVAN LLEAYRVSGR
RLSPIGYGET RPVSSNETEY GRKLNRRVEV LIYANDDLKR QADSGELRY
|
|---|
| |